当前解析结果
SmilChr05G001838| 统一新 Gene ID | SmilChr05G001838 |
|---|---|
| 名称 | SmilChr05G001838 |
| 描述 | uncharacterized SmilChr05G001838 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 18403456 - 18408620 / - |
| NCBI Gene ID | LOC130986509 |
|---|---|
| GeneID | 130986509 |
| locus_tag | - |
| NCBI Name | LOC130986509 |
| 原始查询 | LOC130986509 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919]; symbol=AT1G23110; hit=AT1G23110; species=arabidopsis; confidence=high |
| 产物 | fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919]; symbol=AT1G23110; hit=AT1G23110; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G23110 (AT1G23110)fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919] identity=66.5; qcov=1.01; evalue=8.95e-121; confidence=high |
| Rice | Os08g0433200- identity=64; qcov=1; evalue=2.47e-100; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986509 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057765924.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057765924.1 |
| 3 | Mitochondrion outer membrane | 线粒体外膜 | 0.40000 | XP_057765924.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057765924.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057765924.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:18404502 |
A |
AGT |
2bp_insertion | frameshift_variant | 1 | B113 |
Chr5:18404502 |
A |
AGT |
2bp_insertion | CDS_variant | 1 | B113 |
Chr5:18404583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr5:18406825 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A19,A4,B17,B41 |
Chr5:18406850 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr5:18406880 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B140,C60,C85 |
Chr5:18406902 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A14,B28 |
Chr5:18407018 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B98 |
Chr5:18407129 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B83,C10,C52 |
Chr5:18407147 |
A |
AT |
1bp_insertion | frameshift_variant | 4 | B93,B94,C21,C38 |
Chr5:18407147 |
A |
AT |
1bp_insertion | CDS_variant | 4 | B93,B94,C21,C38 |
Chr5:18407233 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B52,C29,C7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。