当前解析结果
SmilChr05G001991| 统一新 Gene ID | SmilChr05G001991 |
|---|---|
| 名称 | SmilChr05G001991 |
| 描述 | uncharacterized SmilChr05G001991 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 20610673 - 20613085 / + |
| NCBI Gene ID | LOC130986640 |
|---|---|
| GeneID | 130986640 |
| locus_tag | - |
| NCBI Name | LOC130986640 |
| 原始查询 | LOC130986640 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | C2H2-like zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:843905]; symbol=AT1G75710; hit=AT1G75710; species=arabidopsis; confidence=high |
| 产物 | C2H2-like zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:843905]; symbol=AT1G75710; hit=AT1G75710; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G75710 (AT1G75710)C2H2-like zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:843905] identity=49.1; qcov=1.33; evalue=1.95e-123; confidence=high |
| Rice | Os04g0115500- identity=45.7; qcov=1.13; evalue=1.14e-87; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986640 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057766085.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057766085.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057766085.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057766085.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057766085.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:20610922 |
C |
CA |
1bp_insertion | frameshift_variant | 1 | B65 |
Chr5:20610922 |
C |
CA |
1bp_insertion | CDS_variant | 1 | B65 |
Chr5:20610932 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B85,B9,B91,C37,C8 |
Chr5:20611051 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C24 |
Chr5:20611055 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A14,B16,B60,B67,B97 |
Chr5:20611064 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B38,B39,B65 |
Chr5:20611132 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B62,C24,C32,C34,C68 |
Chr5:20611200 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A14,B16,B60,B67,B97 |
Chr5:20611260 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B78 |
Chr5:20611264 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B130,B136,B16,C14,C33 |
Chr5:20611303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B78,C23 |
Chr5:20611313 |
CAA |
C |
2bp_deletion | frameshift_variant | 5 | B139,B17,B55,B87,C50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。