Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001813`

染色体: Chr06 坐标: 21304387-21307981 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001813`
名称	SmilChr06G001813
描述	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	21304387 - 21307981 / `-`

ID 对照

NCBI Gene ID	`LOC130987459`
GeneID	`130987459`
locus_tag	`-`
NCBI Name	`LOC130987459`
原始查询	`LOC130987459`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like
产物	glucose-6-phosphate 1-dehydrogenase%2C cytoplasmic isoform-like
Arabidopsis	`AT5G40760` (G6PD6) glucose-6-phosphate dehydrogenase 6 [Source:NCBI gene (formerly Entrezgene);Acc:834076] identity=80.4; qcov=1; evalue=0; confidence=high
Rice	`Os02g0600400` (OsG6PDH1) - identity=78.4; qcov=0.946; evalue=0; confidence=high
GO	GO:0004345 (glucose-6-phosphate dehydrogenase activity); GO:0005829 (cytosol); GO:0006006 (glucose metabolic process); GO:0009051 (pentose-phosphate shunt, oxidative branch); GO:0050661 (NADP binding)
KEGG	smil00030 (Pentose phosphate pathway - Salvia miltiorrhiza (redroot sage)); smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01200 (Carbon metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	PF00479 (G6PD_N); PF02781 (G6PD_C)
InterPro	-
eggNOG	-
NR	GeneID:130987459

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057766972.1`
2	Cytosol	细胞质基质	1.00000	`XP_057766972.1`
3	Nucleus	细胞核	0.00000	`XP_057766972.1`
4	Chromosome	染色体	0.00000	`XP_057766972.1`
5	Centromere	着丝粒	0.00000	`XP_057766972.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:21304967`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A16,C26
`Chr6:21305131`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:21305257`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D2
`Chr6:21305278`	`TC`	`T`	1bp_deletion	frameshift_variant	9	A5,B110,B50,B60,B62,B68,B86,C12,D3
`Chr6:21305404`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B14,B59,B72,B80
`Chr6:21305410`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C74
`Chr6:21305416`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B112,B132,C1
`Chr6:21305468`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B122,B140
`Chr6:21306952`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:21307261`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B113
`Chr6:21307340`	`TA`	`T`	1bp_deletion	frameshift_variant	13	A25,B10,B106,B15,B17,B19,B70,B85,B94,C12,C20,C56,D7

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057766972.1

515 aa

258

515

G6PD_N

G6PD_C

PF00479 G6PD_N 37-221 aa PF02781 G6PD_C 223-502 aa

XP_057766974.1

515 aa

258

515

G6PD_N

G6PD_C

PF00479 G6PD_N 37-221 aa PF02781 G6PD_C 223-502 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057766972.1`	Pfam	`PF00479`	G6PD_N	Domain	37	221	1.9e-57	195.6	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057766972.1`	Pfam	`PF02781`	G6PD_C	Domain	223	502	7.8e-113	377.1	Glucose-6-phosphate dehydrogenase, C-terminal domain
`XP_057766974.1`	Pfam	`PF00479`	G6PD_N	Domain	37	221	1.9e-57	195.6	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057766974.1`	Pfam	`PF02781`	G6PD_C	Domain	223	502	7.8e-113	377.1	Glucose-6-phosphate dehydrogenase, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057910989.1
CACAGTGATTTAAAGAAAATTATTTAGATAATTTAGATTCACTTCACCACCCTGCAGTCCCTCTAAAACTTGCATATATCAGTATATGTCAATTATTACAACTTATCTGCTATAAAATCGTGTATCCGACATCAAACTTAAAGAAAAAGGTTTAGGTGTTTGTGAATTGGGAGAATATGGCAGCAAATGGTGAATGGCATTGTGAGAAGAGGGCCTTCTCCAAAATTGAGTCTTTTTCACAAGAGAAAGAAAATAATGTG...

XM_057910991.1
CTTCACTTGTCTAAATTTGCCTTGTACTCATTTTCATCTTGTGATTGCCACCTAATGTTGCTTATGAATTTAGATTTAGATAATATATTTTCCAAGAATTTAAAGAAAGTGCATTTACCTGAGAGTTGGTTGATCATGATTCTTTCTCATCTTTGTGTGTTAATTTTAAATTTTTGTGATTCTTGTATCATCCTATAAGTGGTTGGTTTAGGTGTTTGTGAATTGGGAGAATATGGCAGCAAATGGTGAATGGCATTGTG...

CDS

2 records

下载 CDS FASTA

LOC130987459
ATGGCAGCAAATGGTGAATGGCATTGTGAGAAGAGGGCCTTCTCCAAAATTGAGTCTTTTTCACAAGAGAAAGAAAATAATGTGACTGAAACTGGATGCCTTTCGATTATCGTTCTTGGCGCTTCTGGTGACCTTGCTAAGAAGAAGACATTTCCTGCTCTTTTCAATCTTTACCAGCAGGGATTTTTGCAATTGAATGATGTTCACATCTTTGGCTATTCAAGAACCAAACTTTTTGATGATGAATTGAAAGAGAGAAT...

Protein

2 records

下载 Protein FASTA

XP_057766972.1
MAANGEWHCEKRAFSKIESFSQEKENNVTETGCLSIIVLGASGDLAKKKTFPALFNLYQQGFLQLNDVHIFGYSRTKLFDDELKERIRGYLPVGNKVSCNVSEFLQLIKYVSGAYDSREGFQELDKAISEHETSKKSTQGTCRRLFYLALPPSVYPQVCKMIKAYCTNQSDVGGWTRVVVEKPFGKDLASAEELSSQIGELFDEPQIYRIDHYLGKELVQNLLVLRFANRFFLPLWNRDNIANVQIVFREDFGTEGRGGY...

XP_057766974.1
MAANGEWHCEKRAFSKIESFSQEKENNVTETGCLSIIVLGASGDLAKKKTFPALFNLYQQGFLQLNDVHIFGYSRTKLFDDELKERIRGYLPVGNKVSCNVSEFLQLIKYVSGAYDSREGFQELDKAISEHETSKKSTQGTCRRLFYLALPPSVYPQVCKMIKAYCTNQSDVGGWTRVVVEKPFGKDLASAEELSSQIGELFDEPQIYRIDHYLGKELVQNLLVLRFANRFFLPLWNRDNIANVQIVFREDFGTEGRGGY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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