当前解析结果
SmilChr01G000763| 统一新 Gene ID | SmilChr01G000763 |
|---|---|
| 名称 | SmilChr01G000763 |
| 描述 | uncharacterized SmilChr01G000763 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 16722822 - 16723373 / - |
| NCBI Gene ID | LOC130987505 |
|---|---|
| GeneID | 130987505 |
| locus_tag | - |
| NCBI Name | LOC130987505 |
| 原始查询 | LOC130987505 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480]; symbol=MEE60; hit=AT5G05950; species=arabidopsis; confidence=medium |
| 产物 | maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480]; symbol=MEE60; hit=AT5G05950; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G05950 (MEE60)maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480] identity=48.9; qcov=0.973; evalue=1.79e-43; confidence=medium |
| Rice | Os10g0178200- identity=42; qcov=0.962; evalue=2.23e-31; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987505 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057767065.1 |
| 2 | Vacuole | 液泡 | 0.20000 | XP_057767065.1 |
| 3 | Vacuole membrane | 液泡膜 | 0.20000 | XP_057767065.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057767065.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057767065.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:16722912 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr1:16723026 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B129 |
Chr1:16723026 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B129 |
Chr1:16723028 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B129 |
Chr1:16723028 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr1:16723076 |
CCG |
C |
2bp_deletion | frameshift_variant | 1 | C9 |
Chr1:16723076 |
CCG |
C |
2bp_deletion | CDS_variant | 1 | C9 |
Chr1:16723079 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C9 |
Chr1:16723173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr1:16723368 |
C |
CT |
1bp_insertion | frameshift_variant | 14 | B122,B13,B26,B33,B4,B41,B48,B98,C23,C36,C61,C62,C87,D2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。