Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000104`

染色体: Chr06 坐标: 741683-748259 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000104`
名称	SmilChr06G000104
描述	uncharacterized SmilChr06G000104
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	741683 - 748259 / `+`

ID 对照

NCBI Gene ID	`LOC130987650`
GeneID	`130987650`
locus_tag	`-`
NCBI Name	`LOC130987650`
原始查询	`LOC130987650`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Source:NCBI gene (formerly Entrezgene);Acc:816921]; symbol=AT2G23890; hit=AT2G23890; species=arabidopsis; confidence=high
产物	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Source:NCBI gene (formerly Entrezgene);Acc:816921]; symbol=AT2G23890; hit=AT2G23890; species=arabidopsis; confidence=high
Arabidopsis	`AT2G23890` (AT2G23890) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Source:NCBI gene (formerly Entrezgene);Acc:816921] identity=75.5; qcov=0.991; evalue=0; confidence=high
Rice	`Os09g0424600` - identity=70; qcov=0.968; evalue=0; confidence=high
GO	GO:0008253 (5'-nucleotidase activity)
KEGG	-
Pfam	PF05761 (5_nucleotid)
InterPro	-
eggNOG	-
NR	GeneID:130987650

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057767232.1`
2	Mitochondrion matrix	线粒体基质	1.00000	`XP_057767232.1`
3	Cytosol	细胞质基质	0.60000	`XP_057767233.1`
4	Nucleus	细胞核	0.00000	`XP_057767232.1`
5	Chromosome	染色体	0.00000	`XP_057767232.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:742059`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B125,B40,B90,B92,C87
`Chr6:742524`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B81
`Chr6:742798`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B40,D11
`Chr6:745631`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B111,B73

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767232.1

551 aa

276

551

5_nucleotid

PF05761 5_nucleotid 97-542 aa

XP_057767233.1

531 aa

266

531

5_nucleotid

PF05761 5_nucleotid 77-522 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767232.1`	Pfam	`PF05761`	5_nucleotid	Family	97	542	2.4e-149	498.9	5' nucleotidase family
`XP_057767233.1`	Pfam	`PF05761`	5_nucleotid	Family	77	522	2.1e-149	499.1	5' nucleotidase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057911249.1
CTATCACATCAAAATAACCTCCATAGTGAATAAAAAGTACAAATGAATCACTGCAAAAAACCTAAAAGCAAATAAATAACCCAAAGCATTTTAAAATAAAAAAGAAAATAAATTTAATAGTGTATTTTGTGTAAATTATATTTTTAGAAGATATAGTATCGAGCAAGCAAGCATGTACGAGCATCGAAATTGGCGGCTACGCACAAATGGCCCTCCCAAATTCACACTTTTCAAATCTTCACCATTCAAACCCTGAATTT...

XM_057911250.1
TTTAGAAGATATAGTATCGAGCAAGCAAGCATGTACGAGCATCGAAATTGGCGGCTACGCACAAATGGCCCTCCCAAATTCACACTTTTCAAATCTTCACCATTCAAACCCTGAATTTTCTTGTGTCAAATCAGCCCTAATTCATTGATTCCGTTTGGTTGCATTTCATTTCGATCCCAAGAAGCAGGAAATCAATTTTTGTATGGCGTCGTTCCGCAGCAGGAGGAGTCTTCCGTTTGCCTCTTCGCGTCTGCTGCAGA...

CDS

2 records

下载 CDS FASTA

LOC130987650
ATGGCGTCGTTCCGCAGCAGGAGGAGTCTTCCGTTTGCCTCTTCGCGTCTGCTGCAGAGCACGAACCCTGCGCATTATGGAGATGTGGAAGGGTTTGGTGGGAACAGACTTCGCAGATTTAGAACCATTATCACGACAGAGGAAAGGGTACAGAAATTGGAAAAGGATGGGAGCCATATATTGCAAGATGAAATTGCCAAGATTCGGCATGCATTTACTGCTGCGAAAGACAAGTTCCTTAAAATACCAGATGCGCTGAA...

LOC130987650
ATGCATTTCGTTGGAGCCAAATATGTGCAGGGGTTTGGTGGGAACAGACTTCGCAGATTTAGAACCATTATCACGACAGAGGAAAGGGTACAGAAATTGGAAAAGGATGGGAGCCATATATTGCAAGATGAAATTGCCAAGATTCGGCATGCATTTACTGCTGCGAAAGACAAGTTCCTTAAAATACCAGATGCGCTGAAAGAAATGCCCAAATTAGATCCTAAAGGCATATATGTCAATAAGAACTTGAGATTGGACAA...

Protein

2 records

下载 Protein FASTA

XP_057767232.1
MASFRSRRSLPFASSRLLQSTNPAHYGDVEGFGGNRLRRFRTIITTEERVQKLEKDGSHILQDEIAKIRHAFTAAKDKFLKIPDALKEMPKLDPKGIYVNKNLRLDNVQVYGFDYDYTLAHYSANLQCLIYDMAKEYLVNELRYPCSCLEFKYDNSFPIRGLYYDKLKGCLMKLDFFGSIEPGGCYFGRRKLTRSEIDNLYGTRHIGRDQARGLVGLMDFFCFSEACLIADIVQHFVDAKLEFDPSYVYQDVNQAIQHVH...

XP_057767233.1
MHFVGAKYVQGFGGNRLRRFRTIITTEERVQKLEKDGSHILQDEIAKIRHAFTAAKDKFLKIPDALKEMPKLDPKGIYVNKNLRLDNVQVYGFDYDYTLAHYSANLQCLIYDMAKEYLVNELRYPCSCLEFKYDNSFPIRGLYYDKLKGCLMKLDFFGSIEPGGCYFGRRKLTRSEIDNLYGTRHIGRDQARGLVGLMDFFCFSEACLIADIVQHFVDAKLEFDPSYVYQDVNQAIQHVHRSGLVHRGILSDPQKYLVKN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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