Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000146`

染色体: Chr06 坐标: 1017431-1022313 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000146`
名称	SmilChr06G000146
描述	beta-ketoacyl-[acyl-carrier-protein] synthase III A, chloroplastic
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	1017431 - 1022313 / `+`

ID 对照

NCBI Gene ID	`LOC130987689`
GeneID	`130987689`
locus_tag	`-`
NCBI Name	`LOC130987689`
原始查询	`LOC130987689`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	beta-ketoacyl-[acyl-carrier-protein] synthase III A, chloroplastic
产物	beta-ketoacyl-[acyl-carrier-protein] synthase III A%2C chloroplastic
Arabidopsis	`AT1G62640` (KAS III) 3-ketoacyl-acyl carrier protein synthase III [Source:NCBI gene (formerly Entrezgene);Acc:842561] identity=69.5; qcov=1.01; evalue=0; confidence=high
Rice	`Os04g0643300` - identity=59.5; qcov=1.02; evalue=1.22e-163; confidence=high
GO	GO:0004315 (3-oxoacyl-[acyl-carrier-protein] synthase activity); GO:0006633 (fatty acid biosynthetic process); GO:0009507 (chloroplast)
KEGG	smil00061 (Fatty acid biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01212 (Fatty acid metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	PF08541 (ACP_syn_III_C); PF08545 (ACP_syn_III)
InterPro	-
eggNOG	-
NR	GeneID:130987689

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057767283.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057767283.1`
3	Nucleus	细胞核	0.00000	`XP_057767283.1`
4	Chromosome	染色体	0.00000	`XP_057767283.1`
5	Centromere	着丝粒	0.00000	`XP_057767283.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:1017983`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr6:1018035`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B104,B137,B42
`Chr6:1018036`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B22,B34
`Chr6:1018072`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:1018128`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B124,B14,D7
`Chr6:1019074`	`C`	`CT`	1bp_insertion	frameshift_variant	11	B20,B21,B91,B95,C16,C20,C25,C3,C30,C34,C58
`Chr6:1020388`	`C`	`T`	EMS_canonical_SNV	stop_gained	21	A1,A19,A3,B109,B122,B123,B132,B137,B19,B3,B44,B5,B6,B61,B69,B73,C41,C55,C67,C77,C82
`Chr6:1020453`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C21
`Chr6:1020582`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B104,B137,B99
`Chr6:1020632`	`G`	`A`	EMS_canonical_SNV	stop_gained	3	B105,B117,C54
`Chr6:1020632`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B105,B117,C54
`Chr6:1020644`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B137,B34,C24

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767283.1

400 aa

200

400

ACP_syn_III

ACP_syn_III_C

PF08545 ACP_syn_III 170-249 aa PF08541 ACP_syn_III_C 310-399 aa

XP_057767284.1

400 aa

200

400

ACP_syn_III

ACP_syn_III_C

PF08545 ACP_syn_III 170-249 aa PF08541 ACP_syn_III_C 310-399 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767283.1`	Pfam	`PF08545`	ACP_syn_III	Domain	170	249	1.3e-28	99.4	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
`XP_057767283.1`	Pfam	`PF08541`	ACP_syn_III_C	Domain	310	399	6.2e-39	132.8	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
`XP_057767284.1`	Pfam	`PF08545`	ACP_syn_III	Domain	170	249	1.3e-28	99.4	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
`XP_057767284.1`	Pfam	`PF08541`	ACP_syn_III_C	Domain	310	399	6.2e-39	132.8	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057911300.1
AGTTGAACAAACATGATAAAGACAAGTAGAACTATTTTGGCAGGCAATAAATTTATGTTCAAGGTGAAAACGTGGTTGGGCGCAGCTGAATTTCCCATTTTCTTCTCCAAAACCAGGAAAATTTACACTGCAAAACCACCAGAAATGGCCCACACCCTCATGAGTCAAAGGTCTCTCATAGATTAATTGAATGGCGAATGCATCTGGGCTGGTTGCTCCTACAGCTCCCAGTTTGAGGAGGAGATTTTCTCAATCATTAG...

XM_057911301.1
CAGCTGAATTTCCCATTTTCTTCTCCAAAACCAGGAAAATTTACACTGCAAAACCACCAGAAATGGCCCACACCCTCATGAGTCAAAGGGTAATTTACCAAAATGGGATATGATAAACCCATTTCTTTATTCAGCGCTTTCAAAAGATTCAATCTTGGAAATGCCCAGAATGATGTCCAGTTACTGCTTATACACCTGAATCAGCATGCAGTTGCATGTGATGATATAGATACAGGGTTGAGAGAGAGAGAGAGAGAGAG...

CDS

2 records

下载 CDS FASTA

LOC130987689
ATGGCGAATGCATCTGGGCTGGTTGCTCCTACAGCTCCCAGTTTGAGGAGGAGATTTTCTCAATCATTAGGAATCTATCGATCTGGGTTTTGGTTCTACGACGGCGTTTCGAGGCTAACAGTGTGTTCTAGTGCGGCGCAGGGCGCAGAGAAGCTTTCCCTTGCTGAACCCAAAGCGCGCAGACTTGTCAGCAAAGGGTGCAAGTTAGTTGGATGTGGCTCTGCACTGCCAAGTATTCAAATATCCAATGATGATCTCTC...

Protein

2 records

下载 Protein FASTA

XP_057767283.1
MANASGLVAPTAPSLRRRFSQSLGIYRSGFWFYDGVSRLTVCSSAAQGAEKLSLAEPKARRLVSKGCKLVGCGSALPSIQISNDDLSEIVDTSDEWISVRTGIRNRRILSRKDSLTAMATEAAQKALQMAEVDPDDVDLVLLCTSTPEDLFGSAPQIQKALGCSNNPLAYDITAACSGFLLGLVSAACYIRGGGFNNVLVIGADALSRYVDWNDRGSCILFGDAAGAVLLQSCDSEEDGLFAFDMHSDGEGQRHLKAGMK...

XP_057767284.1
MANASGLVAPTAPSLRRRFSQSLGIYRSGFWFYDGVSRLTVCSSAAQGAEKLSLAEPKARRLVSKGCKLVGCGSALPSIQISNDDLSEIVDTSDEWISVRTGIRNRRILSRKDSLTAMATEAAQKALQMAEVDPDDVDLVLLCTSTPEDLFGSAPQIQKALGCSNNPLAYDITAACSGFLLGLVSAACYIRGGGFNNVLVIGADALSRYVDWNDRGSCILFGDAAGAVLLQSCDSEEDGLFAFDMHSDGEGQRHLKAGMK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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