Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000185`

染色体: Chr06 坐标: 1275065-1280519 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000185`
名称	SmilChr06G000185
描述	protein ZINC INDUCED FACILITATOR-LIKE 1-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	1275065 - 1280519 / `-`

ID 对照

NCBI Gene ID	`LOC130987732`
GeneID	`130987732`
locus_tag	`-`
NCBI Name	`LOC130987732`
原始查询	`LOC130987732`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein ZINC INDUCED FACILITATOR-LIKE 1-like
产物	protein ZINC INDUCED FACILITATOR-LIKE 1-like
Arabidopsis	`AT5G13750` (ZIFL1) zinc induced facilitator-like 1 [Source:NCBI gene (formerly Entrezgene);Acc:831220] identity=57.4; qcov=0.96; evalue=0; confidence=high
Rice	`Os11g0135000` (OsZIFL5) - identity=55; qcov=0.97; evalue=0; confidence=high
GO	GO:0022857 (transmembrane transporter activity); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:130987732

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole membrane	液泡膜	1.00000	`XP_057767362.1`
2	Vacuole	液泡	1.00000	`XP_057767364.1`
3	Cell membrane	细胞膜	0.20000	`XP_057767362.1`
4	Nucleus	细胞核	0.00000	`XP_057767362.1`
5	Chromosome	染色体	0.00000	`XP_057767362.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:1275284`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:1275297`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B54,C60,C81,C86
`Chr6:1275310`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A24,B137
`Chr6:1275339`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B28,B6,B84,C67,C79
`Chr6:1275344`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B120,B69
`Chr6:1275875`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B32
`Chr6:1276306`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C37,D6
`Chr6:1276340`	`AC`	`A`	1bp_deletion	frameshift_variant	1	C13
`Chr6:1276340`	`AC`	`A`	1bp_deletion	CDS_variant	1	C13
`Chr6:1276356`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C37,D6
`Chr6:1276626`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B15
`Chr6:1277087`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A22,B122,B4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767362.1

555 aa

278

555

MFS_1

Sugar_tr

PF07690 MFS_1 97-439 aa PF00083 Sugar_tr 131-355 aa

XP_057767363.1

531 aa

266

531

MFS_1

Sugar_tr

PF07690 MFS_1 73-415 aa PF00083 Sugar_tr 107-331 aa

XP_057767364.1

499 aa

250

499

MFS_1

Sugar_tr

PF07690 MFS_1 41-383 aa PF00083 Sugar_tr 75-299 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767362.1`	Pfam	`PF07690`	MFS_1	Family	97	439	3.8e-40	138.6	Major Facilitator Superfamily
`XP_057767362.1`	Pfam	`PF00083`	Sugar_tr	Family	131	355	3e-20	73.3	Sugar (and other) transporter
`XP_057767363.1`	Pfam	`PF07690`	MFS_1	Family	73	415	3.4e-40	138.7	Major Facilitator Superfamily
`XP_057767363.1`	Pfam	`PF00083`	Sugar_tr	Family	107	331	1e-20	74.8	Sugar (and other) transporter
`XP_057767364.1`	Pfam	`PF07690`	MFS_1	Family	41	383	2.7e-40	139.1	Major Facilitator Superfamily
`XP_057767364.1`	Pfam	`PF00083`	Sugar_tr	Family	75	299	8.8e-21	75.0	Sugar (and other) transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057911380.1
TGATGATTAAATGGCAAGATGTATATTTTTTGAAGTGGAGTGAGTACAATGCTTTCATTGTGTACCCAAAAAACGCATTTACTACGTCGGTAGAATACACGAAGCAGCACACACAAGTAGGTAACTAAAATACAACGAGGAATGTGCTCATATCATATCATAGGGGTTGCGAAAATTCAATATAAGTGACTGCAAATCTCAGTTTTCTATGGTGGAGAAACATTCCATCTACACACACAGACAAAAGCCACGTAAGCTGT...

XM_057911379.1
CCCAAAAAACGCATTTACTACGTCGGTAGAATACACGAAGCAGCACACACAAGTAGGTAACTAAAATACAACGAGGAATGTGCTCATATCATATCATAGGGGTTGCGAAAATTCAATATAAGTGACTGCAAATCTCAGTTTTCTATGGTGGAGAAACATTCCATCTACACACACAGACAAAAGCCACGTAAGCTGTGCCAGCTCCTTCACCTCATTTTGTCTAACTCCACTACACGGGTAAAGAAGCAAACAAAGCAGCC...

CDS

3 records

下载 CDS FASTA

LOC130987732
ATGGTGGAGAAACATTCCATCTACACACACAGACAAAAGCCACGTAAGCTGTGCCAGCTCCTTCACCTCATTTTGTCTAACTCCACTACACGGAAAATGGCAGAGAATGCTGCGCCGCTGATCGAGAAACAAGAGTACCACGAGAGCTGCGCGGCGTGCAAGGTTGAACAGATGAAGGATTCCGACGCCGGGATTCCCTTCAAGCTTTTGATTTTGGTCTGGCTCATCACTCTCGCTGCAGCTCTGCCAATATCGTCTCT...

LOC130987732
ATGGTGGAGAAACATTCCATCTACACACACAGACAAAAGCCACGTAAGCTGTGCCAGCTCCTTCACCTCATTTTGTCTAACTCCACTACACGGGTAAAGAAGCAAACAAAGCAGCCTCTACAAATTCCTATTGCAAATGTAATCTTGAGTTTTGCTCCGTTGCAGAAAATGGCAGAGAATGCTGCGCCGCTGATCGAGAAACAAGAGTACCACGAGAGCTGCGCGGCGTGCAAGGTTGAACAGATGAAGGATTCCGACGC...

Protein

3 records

下载 Protein FASTA

XP_057767362.1
MVEKHSIYTHRQKPRKLCQLLHLILSNSTTRVKKQTKQPLQIPIANVILSFAPLQKMAENAAPLIEKQEYHESCAACKVEQMKDSDAGIPFKLLILVWLITLAAALPISSLFPFLYFMVRDLHIADKEEDISYYAGYVGSSFMLGRALTSLLWGLVADKYGRKPVIMFGTLIVVIFNTLFGVSVNFWMAIITRFLLGSLCGTLGPLRAYASEICRKEHQALGMSVISTSWGIGLVIGPAVGGFLAQPAEKYPQMFSEKSI...

XP_057767363.1
MVEKHSIYTHRQKPRKLCQLLHLILSNSTTRKMAENAAPLIEKQEYHESCAACKVEQMKDSDAGIPFKLLILVWLITLAAALPISSLFPFLYFMVRDLHIADKEEDISYYAGYVGSSFMLGRALTSLLWGLVADKYGRKPVIMFGTLIVVIFNTLFGVSVNFWMAIITRFLLGSLCGTLGPLRAYASEICRKEHQALGMSVISTSWGIGLVIGPAVGGFLAQPAEKYPQMFSEKSIFGRFPYFLPCLVISAFALVASILC...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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