Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000207`

染色体: Chr06 坐标: 1404118-1407367 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000207`
名称	SmilChr06G000207
描述	probable protein S-acyltransferase 1
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	1404118 - 1407367 / `-`

ID 对照

NCBI Gene ID	`LOC130987755`
GeneID	`130987755`
locus_tag	`-`
NCBI Name	`LOC130987755`
原始查询	`LOC130987755`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable protein S-acyltransferase 1
产物	probable protein S-acyltransferase 1
Arabidopsis	`AT5G05070` (AT5G05070) DHHC-type zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:830389] identity=50.3; qcov=0.908; evalue=5.37e-130; confidence=high
Rice	`Os12g0131200` - identity=45.5; qcov=0.993; evalue=3.07e-115; confidence=high
GO	GO:0005783 (endoplasmic reticulum); GO:0005794 (Golgi apparatus); GO:0006612 (protein targeting to membrane); GO:0018230 (peptidyl-L-cysteine S-palmitoylation); GO:0019706 (protein-cysteine S-palmitoyltransferase activity)
KEGG	-
Pfam	PF01529 (DHHC)
InterPro	-
eggNOG	-
NR	GeneID:130987755

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	0.80000	`XP_057767390.1`
2	Endoplasmic reticulum	内质网	0.40000	`XP_057767390.1`
3	Endoplasmic reticulum membrane	内质网膜	0.20000	`XP_057767390.1`
4	Vacuole	液泡	0.20000	`XP_057767390.1`
5	Vacuole membrane	液泡膜	0.20000	`XP_057767390.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:1404850`	`GT`	`G`	1bp_deletion	frameshift_variant	11	B107,B111,B117,B129,B134,B26,B31,B52,B93,C5,D2
`Chr6:1404876`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:1404907`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A1,C14,C76
`Chr6:1404915`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:1404951`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C78,C80
`Chr6:1404968`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:1405011`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A15
`Chr6:1405501`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C31,C52
`Chr6:1405546`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr6:1405595`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B104,C31,C52
`Chr6:1405753`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B40
`Chr6:1405827`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B28,B54,B69,C12,C86

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767390.1

412 aa

206

412

DHHC

PF01529 DHHC 157-277 aa

XP_057767392.1

412 aa

206

412

DHHC

PF01529 DHHC 157-277 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767390.1`	Pfam	`PF01529`	DHHC	Family	157	277	2.6e-36	125.4	DHHC palmitoyltransferase
`XP_057767392.1`	Pfam	`PF01529`	DHHC	Family	157	277	2.6e-36	125.4	DHHC palmitoyltransferase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057911409.1
CGCGTAAAAAAAAAAGACAAGAGATTGTCGGAAAAATGTTGTGTTAGAGAGAATGTAGAACAAGGCAGCTGGGGAGCCTGCTTTTAGAGGAATAAACACACAATTGTTTCTTCCTCTACCCATTTCATGCAGCCCCCTTCCACAAAATCTTGATTTGCATACAATTTTTTTTTCTTCTTTTTCCTTAAATACACCAAAAAATTTAACCCAGAAAAGGAAAAAGGAGGAAACTATACGAAAATTTTATGTTATTTGTCTGA...

XM_057911407.1
GCGTAAAAAAAAAAGACAAGAGATTGTCGGAAAAATGTTGTGTTAGAGAGAATGTAGAACAAGGCAGCTGGGGAGCCTGCTTTTAGAGGAATAAACACACAATTGTTTCTTCCTCTACCCATTTCATGCAGCCCCCTTCCACAAAATCTTGATTTGCATACAATTTTTTTTTCTTCTTTTTCCTTAAATACACCAAAAAATTTAACCCAGAAAAGGAAAAAGGAGGAAACTATACGAAAATTTTATGTTATTTGTCTGAT...

CDS

2 records

下载 CDS FASTA

LOC130987755
ATGGGAAATCAAGATTTTGTTGCTGCGCCCCCAAAATGGATGGATCCTCCAACCGTGACGAAGAAGAGGCTCTATCAAGTTTGGAAGGGTAGAAATAATTTTTTGTGTGGTGGGAGATTGATCTTAGGCCCCGATACGCGGTCAGCCCTGCTAACTACCTTGATGATAGGGGGACCTGCATTGGCATTCTGTATCAAGATGTATCTGAGGATTTCGACAGCAGGAGACGTGTCTTGGGGTCATGCTGTCTCGATTGTGGG...

Protein

2 records

下载 Protein FASTA

XP_057767390.1
MGNQDFVAAPPKWMDPPTVTKKRLYQVWKGRNNFLCGGRLILGPDTRSALLTTLMIGGPALAFCIKMYLRISTAGDVSWGHAVSIVGLVLTLLDLSFLFMTSMRNPGIIPRNTKPPVLDNVSLDSFPSIEWIAGVNPEVKPPRTKDVVVNGYVVKVKYCDTCLLYRPPRASHCSTCNNCIQRFDHHCPWLNQCIGARNYATFILFITTSTILCVYVFTFSLVNLLKESGWAWRVLSDDMMLVSLIIYSFIAVWFVGGLSV...

XP_057767392.1
MGNQDFVAAPPKWMDPPTVTKKRLYQVWKGRNNFLCGGRLILGPDTRSALLTTLMIGGPALAFCIKMYLRISTAGDVSWGHAVSIVGLVLTLLDLSFLFMTSMRNPGIIPRNTKPPVLDNVSLDSFPSIEWIAGVNPEVKPPRTKDVVVNGYVVKVKYCDTCLLYRPPRASHCSTCNNCIQRFDHHCPWLNQCIGARNYATFILFITTSTILCVYVFTFSLVNLLKESGWAWRVLSDDMMLVSLIIYSFIAVWFVGGLSV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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