当前解析结果
SmilChr06G000369| 统一新 Gene ID | SmilChr06G000369 |
|---|---|
| 名称 | SmilChr06G000369 |
| 描述 | uncharacterized SmilChr06G000369 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 2849564 - 2851024 / + |
| NCBI Gene ID | LOC130987916 |
|---|---|
| GeneID | 130987916 |
| locus_tag | - |
| NCBI Name | LOC130987916 |
| 原始查询 | LOC130987916 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835162]; symbol=AT5G50900; hit=AT5G50900; species=arabidopsis; confidence=high |
| 产物 | ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835162]; symbol=AT5G50900; hit=AT5G50900; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G50900 (AT5G50900)ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835162] identity=62.3; qcov=0.788; evalue=6.9e-85; confidence=high |
| Rice | Os03g0116900- identity=34; qcov=0.755; evalue=2.36e-28; confidence=low |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987916 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057767603.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057767603.1 |
| 3 | Cytoplasm | 细胞质 | 0.60000 | XP_057767603.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057767603.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057767603.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:2850222 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B48,B66,B95,B97,C76 |
Chr6:2850223 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B43,B77,B97,C5 |
Chr6:2850235 |
C |
T |
EMS_canonical_SNV | stop_gained | 23 | A20,A4,B113,B123,B130,B24,B33,B36,B5,B50,B52,B59,B6,B69,C21,C23,C3,C39,C45,C58,C63,C72,D11 |
Chr6:2850245 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,B93 |
Chr6:2850273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B129,B26,C15 |
Chr6:2850274 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B13,B5,B64,B93,C51 |
Chr6:2850284 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A11,B43,B63,C62 |
Chr6:2850306 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B48,B97 |
Chr6:2850344 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A23,B100,B41,C10 |
Chr6:2850367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B66 |
Chr6:2850391 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:2850417 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B100,B14,B41,C10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。