当前解析结果
SmilChr01G002897| 统一新 Gene ID | SmilChr01G002897 |
|---|---|
| 名称 | SmilChr01G002897 |
| 描述 | uncharacterized SmilChr01G002897 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 47662831 - 47664594 / + |
| NCBI Gene ID | LOC130988006 |
|---|---|
| GeneID | 130988006 |
| locus_tag | - |
| NCBI Name | LOC130988006 |
| 原始查询 | LOC130988006 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838507]; symbol=AT1G19240; hit=AT1G19240; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838507]; symbol=AT1G19240; hit=AT1G19240; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G19240 (AT1G19240)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838507] identity=46.4; qcov=1.04; evalue=8.56e-23; confidence=medium |
| Rice | Os01g0144700- identity=54; qcov=0.463; evalue=3.7e-07; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988006 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057767728.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 0.60000 | XP_057767728.1 |
| 3 | Peroxisome | 过氧化物酶体 | 0.40000 | XP_057767728.1 |
| 4 | Mitochondrion outer membrane | 线粒体外膜 | 0.20000 | XP_057767728.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057767728.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:47663008 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B14,B57 |
Chr1:47663138 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B77 |
Chr1:47664302 |
G |
GTC |
2bp_insertion | frameshift_variant | 2 | C42,D3 |
Chr1:47664302 |
G |
GTC |
2bp_insertion | CDS_variant | 2 | C42,D3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。