当前解析结果
SmilChr06G000473| 统一新 Gene ID | SmilChr06G000473 |
|---|---|
| 名称 | SmilChr06G000473 |
| 描述 | uncharacterized SmilChr06G000473 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 3851487 - 3853646 / - |
| NCBI Gene ID | LOC130988026 |
|---|---|
| GeneID | 130988026 |
| locus_tag | - |
| NCBI Name | LOC130988026 |
| 原始查询 | LOC130988026 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nuclear protein [Source:NCBI gene (formerly Entrezgene);Acc:838178]; symbol=AT1G16080; hit=AT1G16080; species=arabidopsis; confidence=high |
| 产物 | nuclear protein [Source:NCBI gene (formerly Entrezgene);Acc:838178]; symbol=AT1G16080; hit=AT1G16080; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G16080 (AT1G16080)nuclear protein [Source:NCBI gene (formerly Entrezgene);Acc:838178] identity=85.9; qcov=0.936; evalue=2.48e-118; confidence=high |
| Rice | Os08g0266300- identity=85.7; qcov=0.755; evalue=5.52e-87; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988026 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057767753.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057767754.1 |
| 3 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057767753.1 |
| 4 | Cytoplasm | 细胞质 | 0.80000 | XP_057767754.1 |
| 5 | Nucleoplasm | 核质 | 0.20000 | XP_057767754.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:3851884 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B119,B56,B96,C12,C53 |
Chr6:3852092 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B110,B30,B75,B78,C19 |
Chr6:3852112 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
Chr6:3852467 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr6:3852487 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B99 |
Chr6:3852487 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr6:3853101 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,C86 |
Chr6:3853288 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:3853312 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。