Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000689`

染色体: Chr06 坐标: 6094334-6106175 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000689`
名称	SmilChr06G000689
描述	uncharacterized SmilChr06G000689
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	6094334 - 6106175 / `+`

ID 对照

NCBI Gene ID	`LOC130988236`
GeneID	`130988236`
locus_tag	`-`
NCBI Name	`LOC130988236`
原始查询	`LOC130988236`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	MAK10 homologue [Source:NCBI gene (formerly Entrezgene);Acc:815566]; symbol=MAK10; hit=AT2G11000; species=arabidopsis; confidence=high
产物	MAK10 homologue [Source:NCBI gene (formerly Entrezgene);Acc:815566]; symbol=MAK10; hit=AT2G11000; species=arabidopsis; confidence=high
Arabidopsis	`AT2G11000` (MAK10) MAK10 homologue [Source:NCBI gene (formerly Entrezgene);Acc:815566] identity=57.4; qcov=1; evalue=0; confidence=high
Rice	`Os02g0803250` - identity=52.3; qcov=0.566; evalue=8.44e-122; confidence=medium
GO	GO:0017196 (N-terminal peptidyl-methionine acetylation); GO:0031417 (NatC complex)
KEGG	-
Pfam	PF04112 (Mak10); PF25789 (TPR_NAA35)
InterPro	-
eggNOG	-
NR	GeneID:130988236

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057768010.1`
2	Cytoplasm	细胞质	0.80000	`XP_057768010.1`
3	Cytosol	细胞质基质	0.60000	`XP_057768010.1`
4	Nucleoplasm	核质	0.40000	`XP_057768010.1`
5	Chromosome	染色体	0.00000	`XP_057768010.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:6098593`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B103
`Chr6:6100086`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C83
`Chr6:6104512`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B125,C87
`Chr6:6104542`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A2,B130,C43,C86
`Chr6:6105008`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A24,B125,B84,C87
`Chr6:6105019`	`C`	`CT`	1bp_insertion	frameshift_variant	36	A15,A2,A22,B101,B106,B114,B122,B123,B124,B134,B15,B19,B34,B39,B50,B53,B65,B70,B73,B75,B82,B88,B92,B94,C1,C10,C16,C19,C40,C45,C54,C70,C75,C76,C79,C80
`Chr6:6105434`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A24,B125,B84,C87
`Chr6:6105611`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C42
`Chr6:6105620`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B135,B56,B96,C73,D10
`Chr6:6105702`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B135,B56,B96,C73
`Chr6:6105742`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B135,B56,B96,C73

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768010.1

725 aa

362

725

Mak10

TPR_NAA35

PF04112 Mak10 43-184 aa PF25789 TPR_NAA35 352-720 aa

XP_057768011.1

663 aa

332

663

Mak10

TPR_NAA35

PF04112 Mak10 1-122 aa PF25789 TPR_NAA35 290-658 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768010.1`	Pfam	`PF04112`	Mak10	Family	43	184	2.6e-27	96.1	Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
`XP_057768010.1`	Pfam	`PF25789`	TPR_NAA35	Repeat	352	720	1.2e-134	449.7	NAA35-like, TPR repeats
`XP_057768011.1`	Pfam	`PF04112`	Mak10	Family	1	122	1.8e-17	64.1	Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
`XP_057768011.1`	Pfam	`PF25789`	TPR_NAA35	Repeat	290	658	9.5e-135	450.0	NAA35-like, TPR repeats

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057912027.1
TCACTGCACTTCACTCTCTCTCATAATAAACCTCGGAATCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCGCATAACGCAAGACTGAAAAGGGTGAAGCTCGATTATGGCTGAAGCTGAGGGAGTAGGAGATGCGAATGCACCGTTAAGCCCTTCCATTCCTTCCGGCAAGGACACCGCCTGGTTTGATGTCTCGTCTCTCCTCCAGCGCGCCTGCCACGATCTTCGAAATGATGAGCTCATCAGTGGGGAGAATTTCAAT...

XM_057912028.1
AAAATATGAAAATTTTCGGACTTCTTCCATCTCCTTGTTTTTGAAAATTGAATGAAATGCTTAGCATTTCTCTACATTTTGTATCATAAGTGGAGAAATATGAGGAAATCCACCCACGAGAGCTAGTCATAATTCATAAAGACATTAAAGGGTAGAGTAAGTACATAAGATTTTCTCATTGCTATTGACCAAGTCCTTTCCATATTTTAATTTGGTAGACATTTTCAAATAACCACTTATAGAAAAATGCATTCTTTTAG...

CDS

2 records

下载 CDS FASTA

LOC130988236
ATGGCTGAAGCTGAGGGAGTAGGAGATGCGAATGCACCGTTAAGCCCTTCCATTCCTTCCGGCAAGGACACCGCCTGGTTTGATGTCTCGTCTCTCCTCCAGCGCGCCTGCCACGATCTTCGAAATGATGAGCTCATCAGTGGGGAGAATTTCAATCTGTTTGCCGCCATGTCTGCTTTAGAGATAATGGACCCAAAGATGGATTCAGGTATTGTATCTACATATTATTCCGTTGATGAAGCCATTGAGAATGGTGCTGC...

LOC130988236
ATGGACCCAAAGATGGATTCAGGTATTGTATCTACATATTATTCCGTTGATGAAGCCATTGAGAATGGTGCTGCTCCTATTCCATTGAGCTTTGATAGAACAAGTGATATTCAATGTGTTATTGATATAATGGATCATTTTCTTTCTTGTGAGGCAACATGGCATAAAGGAGGTTCGTTAGCGCAAACTGTATTTTCTTGCATCTACCTCTTGAGGCCTGAGAGAACATCATCGCATGCCCTGCTGCATTCTTTCTGCAG...

Protein

2 records

下载 Protein FASTA

XP_057768010.1
MAEAEGVGDANAPLSPSIPSGKDTAWFDVSSLLQRACHDLRNDELISGENFNLFAAMSALEIMDPKMDSGIVSTYYSVDEAIENGAAPIPLSFDRTSDIQCVIDIMDHFLSCEATWHKGGSLAQTVFSCIYLLRPERTSSHALLHSFCRVIRATCSALVSAVSDARTNEEEDLFTMAYGLPLKVNGDEKCLSMIHAVDETLCRQLKACKAPVPKKTVLEDIEPLQTHLDLEEGFCKAVLCRIRFRKHFYHVLTCLRKPQG...

XP_057768011.1
MDPKMDSGIVSTYYSVDEAIENGAAPIPLSFDRTSDIQCVIDIMDHFLSCEATWHKGGSLAQTVFSCIYLLRPERTSSHALLHSFCRVIRATCSALVSAVSDARTNEEEDLFTMAYGLPLKVNGDEKCLSMIHAVDETLCRQLKACKAPVPKKTVLEDIEPLQTHLDLEEGFCKAVLCRIRFRKHFYHVLTCLRKPQGRGLELAKKHIISCLSELDSMLKTEEFLRHNSASGTVENEDEKTTASGCQPVGFDSTLNSRSA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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