当前解析结果
SmilChr06G000755| 统一新 Gene ID | SmilChr06G000755 |
|---|---|
| 名称 | SmilChr06G000755 |
| 描述 | uncharacterized SmilChr06G000755 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 6990271 - 6994330 / - |
| NCBI Gene ID | LOC130988302 |
|---|---|
| GeneID | 130988302 |
| locus_tag | - |
| NCBI Name | LOC130988302 |
| 原始查询 | LOC130988302 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | thermosome subunit gamma [Source:NCBI gene (formerly Entrezgene);Acc:832074]; symbol=AT5G19540; hit=AT5G19540; species=arabidopsis; confidence=high |
| 产物 | thermosome subunit gamma [Source:NCBI gene (formerly Entrezgene);Acc:832074]; symbol=AT5G19540; hit=AT5G19540; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G19540 (AT5G19540)thermosome subunit gamma [Source:NCBI gene (formerly Entrezgene);Acc:832074] identity=68.9; qcov=0.891; evalue=1.37e-122; confidence=high |
| Rice | Os08g0387500- identity=60.6; qcov=0.874; evalue=2.43e-101; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988302 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057768096.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057768096.1 |
| 3 | Chloroplast membrane | 叶绿体膜 | 0.80000 | XP_057768096.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:6990728 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr6:6990779 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B41,B44 |
Chr6:6991568 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr6:6992324 |
AT |
A |
1bp_deletion | frameshift_variant | 24 | A15,A16,A4,B128,B28,B35,B39,B4,B48,B7,B78,B89,B95,B97,C28,C31,C39,C45,C60,C72,C76,C79,D11,D4 |
Chr6:6992360 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B23 |
Chr6:6992391 |
T |
TA |
1bp_insertion | frameshift_variant | 1 | B130 |
Chr6:6992391 |
T |
TA |
1bp_insertion | CDS_variant | 1 | B130 |
Chr6:6992455 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A3 |
Chr6:6994027 |
G |
A |
EMS_canonical_SNV | stop_gained | 9 | A18,B110,B124,B16,B6,B8,B88,C22,C67 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。