Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000850`

染色体: Chr06 坐标: 8054366-8059025 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000850`
名称	SmilChr06G000850
描述	uncharacterized SmilChr06G000850
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	8054366 - 8059025 / `-`

ID 对照

NCBI Gene ID	`LOC130988383`
GeneID	`130988383`
locus_tag	`-`
NCBI Name	`LOC130988383`
原始查询	`LOC130988383`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820479]; symbol=AT3G12940; hit=AT3G12940; species=arabidopsis; confidence=high
产物	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820479]; symbol=AT3G12940; hit=AT3G12940; species=arabidopsis; confidence=high
Arabidopsis	`AT3G12940` (AT3G12940) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820479] identity=72.6; qcov=1.01; evalue=0; confidence=high
Rice	`Os07g0496900` - identity=62.2; qcov=1.01; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130988383

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057768186.1`
2	Cytoplasm	细胞质	1.00000	`XP_057768186.1`
3	Cytosol	细胞质基质	0.40000	`XP_057768186.1`
4	Chromosome	染色体	0.00000	`XP_057768186.1`
5	Centromere	着丝粒	0.00000	`XP_057768186.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:8055153`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B109
`Chr6:8055189`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B25,C49,C9
`Chr6:8057203`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A9
`Chr6:8057279`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:8057311`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B115,B65,B71,C47,D11
`Chr6:8057747`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B75,D2
`Chr6:8057818`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C87
`Chr6:8057863`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B75,D2
`Chr6:8058004`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057912204.1
GTGAAGCTTTTTTTTTTTCCCAAGTTGTGGAAATTGAACTCCGAAATTTTCATAACATGACAAAGATGTTTAAATGTCCGAAAAATTACTTGTGAGATATTGGCTTTCCAAGTGAGAGCTCAAAAAAGTGCGTTTGATCTGGCGCCAACAGAGATTCATGAATTGAAAATTTAGGGGAGACCGGCAAGAAGAGGAGGAGGACGACGATCAAAGCAAAGAAGCAATCAATTGATGCCCAGATCTTCAAAAAATTTATATCA...

XM_057912205.1
GTGAAGCTTTTTTTTTTTCCCAAGTTGTGGAAATTGAACTCCGAAATTTTCATAACATGACAAAGATGTTTAAATGTCCGAAAAATTACTTGTGAGATATTGGCTTTCCAAGTGAGAGCTCAAAAAAGTGCGTTTGATCTGGCGCCAACAGAGATTCATGAATTGAAAATTTAGGGGAGACCGGCAAGAAGAGGAGGAGGACGACGATCAAAGCAAAGAAGCAATCAATTGATGCCCAGATCTTCAAAAAATTTATATCA...

CDS

3 records

下载 CDS FASTA

LOC130988383
ATGGCAGGCAATGGCCTGCCGACACTGGGCCGGGTGAAACTTGTCGATTTAATACCATCCGAAGGCCTTCCTTCGGATTCGTATAAACTGTCAGTTTCGACTTTGTCACAGTCCTTGGCTCAATATTCAGCCGCTATTATCCAATTCCCCATGAATGTTGGAGCTCTTTTAAGGTCTTGTCTGGAGTCATCACGTCTCTACTTTCATCATAAGCCGCCATTCCCTTCTGCTGATAGTATTCAGCACAGCGAGTCTCGTGA...

Protein

3 records

下载 Protein FASTA

XP_057768186.1
MAGNGLPTLGRVKLVDLIPSEGLPSDSYKLSVSTLSQSLAQYSAAIIQFPMNVGALLRSCLESSRLYFHHKPPFPSADSIQHSESREWCKTSGYRADPHMWQEIYDFRPGLTSTEPGNEIEIPPAGLVDIYSLLGKASRDILDAISFYLNLRSSPFTELLDNVPLRNREISSSVVSVCCHGRPSFQGAQHHNLTAQEDGQIVMFSDHDYQVDRTLLTLLKSDKAGLYIRDLHGHWVLVDGDLGPQEAIVYPGLALYQATA...

XP_057768187.1
MAGNGLPTLGRVKLVDLIPSEGLPSDSYKLSVSTLSQSLAQYSAAIIQFPMNVGALLRSCLESSRLYFHHKPPFPSADSIQHSESREWCKTSGYRADPHMWQEIYDFRPGLTSTEPGNEIEIPPAGLVDIYSLLGKASRDILDAISFYLNLRSSPFTELLDNVPLRNREISSSVVSVCCHGRPSFQGAQHHNLTAQEDGQIVMFSDHDYQVDRTLLTLLKSDKAGLYIRDLHGHWVLVDGDLGPQEAIVYPGLALYQATA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

JBrowse

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