当前解析结果
SmilChr06G000915| 统一新 Gene ID | SmilChr06G000915 |
|---|---|
| 名称 | SmilChr06G000915 |
| 描述 | uncharacterized SmilChr06G000915 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 8674613 - 8678461 / + |
| NCBI Gene ID | LOC130988449 |
|---|---|
| GeneID | 130988449 |
| locus_tag | - |
| NCBI Name | LOC130988449 |
| 原始查询 | LOC130988449 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835787]; symbol=AT5G56850; hit=AT5G56850; species=arabidopsis; confidence=weak |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835787]; symbol=AT5G56850; hit=AT5G56850; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G56850 (AT5G56850)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835787] identity=51.6; qcov=0.213; evalue=1.06e-33; confidence=weak |
| Rice | Os05g0232200- identity=40.2; qcov=0.166; evalue=1.75e-16; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988449 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.60000 | XP_057768271.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057768271.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057768271.1 |
| 4 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057768271.1 |
| 5 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057768283.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:8675575 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B95 |
Chr6:8676118 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B23,D3 |
Chr6:8676386 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,B23,C83,D11,D3 |
Chr6:8676392 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B91 |
Chr6:8676501 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr6:8676519 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A14,C83,D3 |
Chr6:8676693 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B113,B140,B78,C17,C61 |
Chr6:8676707 |
A |
AAG |
2bp_insertion | frameshift_variant | 10 | B101,B125,B126,B17,B29,B95,C18,C44,C55,C87 |
Chr6:8676810 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr6:8676811 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B113,B140,B78,C17,C61 |
Chr6:8676862 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B107 |
Chr6:8676876 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,B107 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
19 records
下载 cDNA FASTA19 records
下载 CDS FASTA19 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。