Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000926`

染色体: Chr06 坐标: 8788692-8797229 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000926`
名称	SmilChr06G000926
描述	K(+) efflux antiporter 4-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	8788692 - 8797229 / `+`

ID 对照

NCBI Gene ID	`LOC130988460`
GeneID	`130988460`
locus_tag	`-`
NCBI Name	`LOC130988460`
原始查询	`LOC130988460`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	K(+) efflux antiporter 4-like
产物	K(+) efflux antiporter 4-like
Arabidopsis	`AT2G19600` (KEA4) K+ efflux antiporter 4 [Source:NCBI gene (formerly Entrezgene);Acc:816479] identity=79.2; qcov=0.948; evalue=0; confidence=high
Rice	`Os06g0561200` - identity=80.2; qcov=0.91; evalue=0; confidence=high
GO	GO:0015386 (potassium:proton antiporter activity); GO:0016020 (membrane); GO:0071805 (potassium ion transmembrane transport); GO:1902600 (proton transmembrane transport)
KEGG	-
Pfam	PF00999 (Na_H_Exchanger)
InterPro	-
eggNOG	-
NR	GeneID:130988460

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057768300.1`
2	Trans-golgi network	Trans-golgi network	0.80000	`XP_057768300.1`
3	Vacuole	液泡	0.40000	`XP_057768299.1`
4	Vacuole membrane	液泡膜	0.40000	`XP_057768299.1`
5	Endoplasmic reticulum	内质网	0.20000	`XP_057768299.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:8790818`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C40
`Chr6:8791850`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B28,C71
`Chr6:8793432`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B137,B140,C4,C48
`Chr6:8794220`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B23,D3
`Chr6:8794496`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B50
`Chr6:8794496`	`TC`	`T`	1bp_deletion	CDS_variant	1	B50
`Chr6:8794679`	`TG`	`T`	1bp_deletion	frameshift_variant	1	C65
`Chr6:8794679`	`TG`	`T`	1bp_deletion	CDS_variant	1	C65
`Chr6:8795831`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr6:8796687`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C24
`Chr6:8797013`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B128,B66,C19,C46

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768299.1

583 aa

292

583

Na_H_Exchanger

PF00999 Na_H_Exchanger 157-535 aa

XP_057768300.1

571 aa

286

571

Na_H_Exchanger

PF00999 Na_H_Exchanger 157-523 aa

XP_057768301.1

566 aa

283

566

Na_H_Exchanger

PF00999 Na_H_Exchanger 157-535 aa

XP_057768302.1

554 aa

277

554

Na_H_Exchanger

PF00999 Na_H_Exchanger 157-523 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768299.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	157	535	1.1e-65	222.7	Sodium/hydrogen exchanger, transmembrane
`XP_057768300.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	157	523	9.8e-73	245.9	Sodium/hydrogen exchanger, transmembrane
`XP_057768301.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	157	535	1e-65	222.8	Sodium/hydrogen exchanger, transmembrane
`XP_057768302.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	157	523	9e-73	246.0	Sodium/hydrogen exchanger, transmembrane

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057912316.1
GGCGAAATTCGATAGATTCTTCAACTAATAAATTTTGACAAAAGGCCGGGGGGGGGGGGGGGATGGTATATATATTATATTTATACAGACAAAAAAAACTCGCTCCAAGTTGGAACACTTTACGAGGCAACAAGCCACCTGGAGCAGCCACCGCACTAGACGGCGCGTCGCTCACACGCTCCGTGTCCCGCGTGGCCCCAACCTACTCTCTTTGGTAGATCTCAATCGCCGAGTATCTGGGATGAGTAAAGTTGAGAAAC...

XM_057912318.1
ATTATATTTATACAGACAAAAAAAACTCGCTCCAAGTTGGAACACTTTACGAGGCAACAAGCCACCTGGAGCAGCCACCGCACTAGACGGCGCGTCGCTCACACGCTCCGTGTCCCGCGTGGCCCCAACCTACTCTCTTTGGTAGATCTCAATCGCCGAGTATCTGGGATGAGTAAAGTTGAGAAACTCCTTTTATGCAATTCACTCCACCGCCACCGCCTCCACCTCCGCCGTCTCTGCTAACTTGCGCGGGGGCCTTA...

CDS

4 records

下载 CDS FASTA

LOC130988460
ATGCGAACATTTTTTGCTCTCGTGATTCTCTTCTATTTCATTCTGTCGCCGCTCATCGCCGGCGACTCGATGGCTGAAACCGGCGGAGTTAATGGTACGGCCTCAAACGATACGTCCTCGCGAAAGGAAAGCACTCTTGCCGATATGATTGATCACGCATTGGAGAAAGAGTTCAACGAGACTGATGAACTCGCCGACGTCAAAGATCATGGAAGCTTCAACAACAGTGTTAACGAACAGCAGGCAGTTCTGGAAACTGT...

Protein

4 records

下载 Protein FASTA

XP_057768299.1
MRTFFALVILFYFILSPLIAGDSMAETGGVNGTASNDTSSRKESTLADMIDHALEKEFNETDELADVKDHGSFNNSVNEQQAVLETVARVKPKKNETKDEKSFQFHDVFNLDNENQPEETPTLIDSKDNVFIMSNRKSKFPILQLDLRFISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSLIGPGGFSIVSEMVQVETVAQFGVIFLLFALGLEFSVVKIRVVRAVAFFGGLLQILLFMCLCGITALLCGGEASEGV...

XP_057768300.1
MRTFFALVILFYFILSPLIAGDSMAETGGVNGTASNDTSSRKESTLADMIDHALEKEFNETDELADVKDHGSFNNSVNEQQAVLETVARVKPKKNETKDEKSFQFHDVFNLDNENQPEETPTLIDSKDNVFIMSNRKSKFPILQLDLRFISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSLIGPGGFSIVSEMVQVETVAQFGVIFLLFALGLEFSVVKIRVVRAVAFFGGLLQILLFMCLCGITALLCGGEASEGV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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