当前解析结果
SmilChr06G001000| 统一新 Gene ID | SmilChr06G001000 |
|---|---|
| 名称 | SmilChr06G001000 |
| 描述 | phosphatidylglycerophosphate phosphatase PTPMT2-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 9895619 - 9898558 / - |
| NCBI Gene ID | LOC130988535 |
|---|---|
| GeneID | 130988535 |
| locus_tag | - |
| NCBI Name | LOC130988535 |
| 原始查询 | LOC130988535 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | phosphatidylglycerophosphate phosphatase PTPMT2-like |
| 产物 | phosphatidylglycerophosphate phosphatase PTPMT2-like |
| Arabidopsis | AT5G56610 (AT5G56610)Phosphotyrosine protein phosphatases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835762] identity=72.2; qcov=0.676; evalue=1.68e-100; confidence=high |
| Rice | Os01g0739200 (OsPP14)- identity=56; qcov=1.1; evalue=9.36e-115; confidence=high |
| GO | GO:0004439 (phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity); GO:0006470 (protein dephosphorylation); GO:0008138 (protein tyrosine/serine/threonine phosphatase activity) |
| KEGG | - |
| Pfam | PF00782 (DSPc); PF22784 (PTP-SAK); PF22785 (Tc-R-P) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988535 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057768399.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 0.20000 | XP_057768399.1 |
| 3 | Mitochondrion outer membrane | 线粒体外膜 | 0.20000 | XP_057768399.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057768399.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057768399.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057768399.1PF22784
PTP-SAK 81-183 aa
PF22785
Tc-R-P 85-173 aa
PF00782
DSPc 105-208 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057768399.1 |
Pfam | PF22784 |
PTP-SAK | Domain | 81 | 183 | 2.8e-13 | 50.9 | Swiss Army Knife protein, DSP-PTPase phosphatase domain |
XP_057768399.1 |
Pfam | PF22785 |
Tc-R-P | Domain | 85 | 173 | 5.4e-12 | 46.9 | Polymorphic toxin system, DSP-PTPase phosphatase |
XP_057768399.1 |
Pfam | PF00782 |
DSPc | Domain | 105 | 208 | 9.6e-19 | 68.2 | Dual specificity phosphatase, catalytic domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。