当前解析结果
SmilChr01G002966| 统一新 Gene ID | SmilChr01G002966 |
|---|---|
| 名称 | SmilChr01G002966 |
| 描述 | uncharacterized SmilChr01G002966 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 48552879 - 48554604 / - |
| NCBI Gene ID | LOC130988636 |
|---|---|
| GeneID | 130988636 |
| locus_tag | - |
| NCBI Name | LOC130988636 |
| 原始查询 | LOC130988636 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DBH-like monooxygenase [Source:NCBI gene (formerly Entrezgene);Acc:833486]; symbol=AT5G35320; hit=AT5G35320; species=arabidopsis; confidence=medium |
| 产物 | DBH-like monooxygenase [Source:NCBI gene (formerly Entrezgene);Acc:833486]; symbol=AT5G35320; hit=AT5G35320; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G35320 (AT5G35320)DBH-like monooxygenase [Source:NCBI gene (formerly Entrezgene);Acc:833486] identity=35.7; qcov=1.08; evalue=6.7e-27; confidence=medium |
| Rice | Os02g0141500- identity=31.6; qcov=1.04; evalue=1.01e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988636 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057768516.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057768516.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057768516.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057768516.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057768516.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:48553313 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B106,B123,B55,B62,D9 |
Chr1:48553358 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B49 |
Chr1:48553976 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C31 |
Chr1:48554028 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B117,C65 |
Chr1:48554136 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B53 |
Chr1:48554351 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B104,C32,C68 |
Chr1:48554377 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B94,C12,C31,C80 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。