Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001145`

染色体: Chr06 坐标: 11562583-11584016 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001145`
名称	SmilChr06G001145
描述	uncharacterized SmilChr06G001145
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	11562583 - 11584016 / `+`

ID 对照

NCBI Gene ID	`LOC130988663`
GeneID	`130988663`
locus_tag	`-`
NCBI Name	`LOC130988663`
原始查询	`LOC130988663`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831422]; symbol=AT5G15680; hit=AT5G15680; species=arabidopsis; confidence=high
产物	ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831422]; symbol=AT5G15680; hit=AT5G15680; species=arabidopsis; confidence=high
Arabidopsis	`AT5G15680` (AT5G15680) ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831422] identity=85.3; qcov=0.639; evalue=0; confidence=high
Rice	`Os02g0830801` - identity=78.3; qcov=0.342; evalue=0; confidence=low
GO	GO:0000902 (cell morphogenesis); GO:0005938 (cell cortex); GO:0030427 (site of polarized growth)
KEGG	-
Pfam	PF14222 (MOR2-PAG1_N); PF14225 (MOR2-PAG1_C); PF14228 (MOR2-PAG1_mid)
InterPro	-
eggNOG	-
NR	GeneID:130988663

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057768555.1`
2	Cytosol	细胞质基质	1.00000	`XP_057768555.1`
3	Cytoplasmic vesicle	细胞质囊泡	0.20000	`XP_057768555.1`
4	Autophagosome	Autophagosome	0.20000	`XP_057768555.1`
5	Vesicle	囊泡	0.20000	`XP_057768557.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:11564069`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B113,B91
`Chr6:11569337`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A22,B80,B99,C30
`Chr6:11572866`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C87
`Chr6:11573410`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C13
`Chr6:11575961`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B88
`Chr6:11576215`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B106,B17,B53
`Chr6:11577140`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B104,B52,B70,C62
`Chr6:11577146`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr6:11579847`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr6:11580045`	`TCA`	`T`	2bp_deletion	frameshift_variant	1	C72
`Chr6:11580045`	`TCA`	`T`	2bp_deletion	CDS_variant	1	C72
`Chr6:11580088`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B72

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768555.1

2152 aa

1076

2152

MOR2-PAG1_N

MOR2-PAG1_mid

MOR2-PAG1_C

PF14222 MOR2-PAG1_N 85-584 aa PF14228 MOR2-PAG1_mid 620-1737 aa PF14225 MOR2-PAG1_C 1762-2045 aa

XP_057768556.1

2152 aa

1076

2152

MOR2-PAG1_N

MOR2-PAG1_mid

MOR2-PAG1_C

PF14222 MOR2-PAG1_N 85-584 aa PF14228 MOR2-PAG1_mid 620-1737 aa PF14225 MOR2-PAG1_C 1762-2045 aa

XP_057768557.1

2079 aa

1040

2079

MOR2-PAG1_N

MOR2-PAG1_mid

MOR2-PAG1_C

PF14222 MOR2-PAG1_N 85-584 aa PF14228 MOR2-PAG1_mid 620-709 aa PF14228 MOR2-PAG1_mid 756-1664 aa PF14225 MOR2-PAG1_C 1689-1972 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768555.1`	Pfam	`PF14222`	MOR2-PAG1_N	Family	85	584	7.9e-97	326.2	Cell morphogenesis N-terminal
`XP_057768555.1`	Pfam	`PF14228`	MOR2-PAG1_mid	Family	620	1737	0	2296.9	Cell morphogenesis central region
`XP_057768555.1`	Pfam	`PF14225`	MOR2-PAG1_C	Family	1762	2045	4.8e-56	191.0	Cell morphogenesis C-terminal
`XP_057768556.1`	Pfam	`PF14222`	MOR2-PAG1_N	Family	85	584	7.9e-97	326.2	Cell morphogenesis N-terminal
`XP_057768556.1`	Pfam	`PF14228`	MOR2-PAG1_mid	Family	620	1737	0	2296.9	Cell morphogenesis central region
`XP_057768556.1`	Pfam	`PF14225`	MOR2-PAG1_C	Family	1762	2045	4.8e-56	191.0	Cell morphogenesis C-terminal
`XP_057768557.1`	Pfam	`PF14222`	MOR2-PAG1_N	Family	85	584	7.2e-97	326.3	Cell morphogenesis N-terminal
`XP_057768557.1`	Pfam	`PF14228`	MOR2-PAG1_mid	Family	620	709	0	2033.9	Cell morphogenesis central region
`XP_057768557.1`	Pfam	`PF14228`	MOR2-PAG1_mid	Family	756	1664	0	2033.9	Cell morphogenesis central region
`XP_057768557.1`	Pfam	`PF14225`	MOR2-PAG1_C	Family	1689	1972	4.6e-56	191.0	Cell morphogenesis C-terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057912572.1
GACAACAAATCAACTGAAGAATAGAATACCCCAATTCCGTGAATTCCCAAATTCAATTTCATACCTGTCAACCCCATTTCTTGAGCTCCCAAATTCCATTTATTCCCGTCCTTTGCTCACTCACGATTTCACGTACCTCACACACACATGTTGAGCTCCAGAGAGAGAAATTCAGGGTGACACAAAAGTTAGGTTCGGGCCGGGTCCGGGTTGAGGGGAAGAGAGTTCAAAATGGGGTGTGGGTCCGCGGATTTGGGTGC...

XM_057912574.1
TCAACTGAAGAATAGAATACCCCAATTCCGTGAATTCCCAAATTCAATTTCATACCTGTCAACCCCATTTCTTGAGCTCCCAAATTCCATTTATTCCCGTCCTTTGCTCACTCACGATTTCACGTACCTCACACACACATGTTGAGCTCCAGAGAGAGAAATTCAGGGTGACACAAAAGTTAGGTTCGGGCCGGGTCCGGGTTGAGGGGAAGAGAGTTCAAAATGGGGTGTGGGTCCGCGGATTTGGGTGCTGATGGGTT...

CDS

3 records

下载 CDS FASTA

LOC130988663
ATGAAGGCTGGGAGTGCGGCAAAACTGATTGTCGATGCACTGCTGCAGCGTTTCCTTCCTCTTGCTAGGCGACGCATTGAAACTGCTCAAGTTCAGGATGGACAGTACCTTCGGCCATCAGATCCAGCTTATGAACAAGTATTGGATTCTTTAGCAATGGTGGCTCGACATACCCCTGTACCTTTACTGGAGGCTCTTTTAAGATGGAGAGAAAGTGAATCTCCAAAAGGTGCAAATGATGCTTCAACATTTCAGAGGAA...

Protein

3 records

下载 Protein FASTA

XP_057768555.1
MKAGSAAKLIVDALLQRFLPLARRRIETAQVQDGQYLRPSDPAYEQVLDSLAMVARHTPVPLLEALLRWRESESPKGANDASTFQRKLAVECIFCSACIRFVECCPQEGLTEKLWIGLENFVFDWLINADRVVSQVEYPSLVDLRGLLLDLVAQLLGALSRIRFSSVTERFFMELNTRRIDTSVARSETLSIINGMRYLKLGVKTEGGLNASASFVAKANPLNRAPHKRKSELHHALCNMLSNILAPLADGGKGQWPPTG...

XP_057768556.1
MKAGSAAKLIVDALLQRFLPLARRRIETAQVQDGQYLRPSDPAYEQVLDSLAMVARHTPVPLLEALLRWRESESPKGANDASTFQRKLAVECIFCSACIRFVECCPQEGLTEKLWIGLENFVFDWLINADRVVSQVEYPSLVDLRGLLLDLVAQLLGALSRIRFSSVTERFFMELNTRRIDTSVARSETLSIINGMRYLKLGVKTEGGLNASASFVAKANPLNRAPHKRKSELHHALCNMLSNILAPLADGGKGQWPPTG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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