当前解析结果
SmilChr06G001207| 统一新 Gene ID | SmilChr06G001207 |
|---|---|
| 名称 | SmilChr06G001207 |
| 描述 | uncharacterized SmilChr06G001207 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 12344646 - 12347440 / + |
| NCBI Gene ID | LOC130988724 |
|---|---|
| GeneID | 130988724 |
| locus_tag | - |
| NCBI Name | LOC130988724 |
| 原始查询 | LOC130988724 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os07g0298100; species=rice; confidence=low |
| 产物 | hit=Os07g0298100; species=rice; confidence=low |
| Arabidopsis | AT2G03630 (AT2G03630)suppressor SRP40-like protein [Source:NCBI gene (formerly Entrezgene);Acc:814892] identity=53.7; qcov=0.392; evalue=6.53e-11; confidence=low |
| Rice | Os07g0298100- identity=57.4; qcov=0.316; evalue=1.01e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988724 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057768639.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057768639.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057768640.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057768640.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057768639.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:12345731 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:12345875 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr6:12345917 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B41,B44 |
Chr6:12345932 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,C87,D11 |
Chr6:12345933 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C6,D10 |
Chr6:12345971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B84 |
Chr6:12345974 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B9,C37 |
Chr6:12345998 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B9,C37 |
Chr6:12346001 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B15,B16,C23 |
Chr6:12346038 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | C9 |
Chr6:12346038 |
GA |
G |
1bp_deletion | CDS_variant | 1 | C9 |
Chr6:12346058 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C17 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。