Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001405`

染色体: Chr06 坐标: 14754438-14757398 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001405`
名称	SmilChr06G001405
描述	FT-interacting protein 1-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	14754438 - 14757398 / `-`

ID 对照

NCBI Gene ID	`LOC130988898`
GeneID	`130988898`
locus_tag	`-`
NCBI Name	`LOC130988898`
原始查询	`LOC130988898`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	FT-interacting protein 1-like
产物	FT-interacting protein 1-like
Arabidopsis	`AT5G06850` (FTIP1) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:NCBI gene (formerly Entrezgene);Acc:830576] identity=70.6; qcov=1.03; evalue=0; confidence=high
Rice	`Os05g0370600` (OsFTIP7) - identity=65.7; qcov=1.02; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	PF00168 (C2); PF08372 (PRT_C)
InterPro	-
eggNOG	-
NR	GeneID:130988898

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	0.80000	`XP_057768849.1`
2	Cell membrane	细胞膜	0.60000	`XP_057768849.1`
3	Endoplasmic reticulum membrane	内质网膜	0.60000	`XP_057768849.1`
4	Vesicle	囊泡	0.20000	`XP_057768849.1`
5	Endosome	内体	0.20000	`XP_057768849.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:14754551`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B14,B53,B64,C6,D5
`Chr6:14754557`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr6:14754694`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B47
`Chr6:14754790`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr6:14754798`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B84
`Chr6:14754889`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C65
`Chr6:14755014`	`AC`	`A`	1bp_deletion	frameshift_variant	2	B46,B52
`Chr6:14755014`	`AC`	`A`	1bp_deletion	CDS_variant	2	B46,B52
`Chr6:14755751`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B140,C84
`Chr6:14755758`	`GC`	`G`	1bp_deletion	frameshift_variant	1	B57
`Chr6:14755758`	`GC`	`G`	1bp_deletion	CDS_variant	1	B57
`Chr6:14755766`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B47

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768849.1

792 aa

396

792

PRT_C

PF00168 C2 75-180 aa PF00168 C2 239-342 aa PF00168 C2 392-492 aa PF08372 PRT_C 637-792 aa

XP_057768850.1

763 aa

382

763

PRT_C

PF00168 C2 46-151 aa PF00168 C2 210-313 aa PF00168 C2 363-463 aa PF08372 PRT_C 608-763 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768849.1`	Pfam	`PF00168`	C2	Domain	75	180	6.9e-63	210.1	C2 domain
`XP_057768849.1`	Pfam	`PF00168`	C2	Domain	239	342	6.9e-63	210.1	C2 domain
`XP_057768849.1`	Pfam	`PF00168`	C2	Domain	392	492	6.9e-63	210.1	C2 domain
`XP_057768849.1`	Pfam	`PF08372`	PRT_C	Family	637	792	1e-73	247.0	Plant phosphoribosyltransferase C-terminal
`XP_057768850.1`	Pfam	`PF00168`	C2	Domain	46	151	5.9e-63	210.3	C2 domain
`XP_057768850.1`	Pfam	`PF00168`	C2	Domain	210	313	5.9e-63	210.3	C2 domain
`XP_057768850.1`	Pfam	`PF00168`	C2	Domain	363	463	5.9e-63	210.3	C2 domain
`XP_057768850.1`	Pfam	`PF08372`	PRT_C	Family	608	763	8.3e-74	247.3	Plant phosphoribosyltransferase C-terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057912866.1
GCAACCTTTGTCATCATGGATTGTGCCATTGCAACACTTTTTTGGCATAGAAAAAAGCAGCTGATCAAGATCATTTCAAACCTCAAATATTTTCCAAAGAAAATGAATCCCCTGGATGAGTACAGAATCAAGGACACGAAGCCGCGGCTGGGCGAGCGGTGGCCGCACGGCGGCGGGCGCAGCTGGATCGGGGGCGACAAGATCACGACCACCTACGACCTAGTGGAACAGATGTTCTACCTCTACGTCCGCGTGGTCAA...

XM_057912867.1
TCATTCAAATTTCCCTCCCTTAATTTCCTCCTCTTTTTCTCCTTCTCGACATATATATCGCCTTCATATCTCATTCAACTAATCAAACTTGATTCATCGATGACCATTATCGTATAATCTCATGCTAAAAGGCATTGGCATAGAAAAAAGCAGCTGATCAAGATCATTTCAAACCTCAAATATTTTCCAAAGAAAATGAATCCCCTGGATGAGTACAGAATCAAGGACACGAAGCCGCGGCTGGGCGAGCGGTGGCCGCA...

CDS

2 records

下载 CDS FASTA

LOC130988898
ATGGATTGTGCCATTGCAACACTTTTTTGGCATAGAAAAAAGCAGCTGATCAAGATCATTTCAAACCTCAAATATTTTCCAAAGAAAATGAATCCCCTGGATGAGTACAGAATCAAGGACACGAAGCCGCGGCTGGGCGAGCGGTGGCCGCACGGCGGCGGGCGCAGCTGGATCGGGGGCGACAAGATCACGACCACCTACGACCTAGTGGAACAGATGTTCTACCTCTACGTCCGCGTGGTCAAGGCTCGCGATCTCCC...

LOC130988898
ATGAATCCCCTGGATGAGTACAGAATCAAGGACACGAAGCCGCGGCTGGGCGAGCGGTGGCCGCACGGCGGCGGGCGCAGCTGGATCGGGGGCGACAAGATCACGACCACCTACGACCTAGTGGAACAGATGTTCTACCTCTACGTCCGCGTGGTCAAGGCTCGCGATCTCCCCACCAACGCAGTCACCGGCGGCTGCGACCCCTACGTCGAGGTCAAGCTCGGCAACTACAAGGGCAAAACGCAGCGTTTCGAGAAGAA...

Protein

2 records

下载 Protein FASTA

XP_057768849.1
MDCAIATLFWHRKKQLIKIISNLKYFPKKMNPLDEYRIKDTKPRLGERWPHGGGRSWIGGDKITTTYDLVEQMFYLYVRVVKARDLPTNAVTGGCDPYVEVKLGNYKGKTQRFEKKTSPEWNQVFAFSKDKIQSSIVEIFVREKEMVGRDDYLGRVDFDLNEVPTRLPPDSPLAPQWYRLEERRRAPESRLRGEVMLAVWIGSQADEAFPEAWHSDAAAVHGDGVFSVRSKVYVSPKLWYLRVNVIEAQDVEAAEAAPVF...

XP_057768850.1
MNPLDEYRIKDTKPRLGERWPHGGGRSWIGGDKITTTYDLVEQMFYLYVRVVKARDLPTNAVTGGCDPYVEVKLGNYKGKTQRFEKKTSPEWNQVFAFSKDKIQSSIVEIFVREKEMVGRDDYLGRVDFDLNEVPTRLPPDSPLAPQWYRLEERRRAPESRLRGEVMLAVWIGSQADEAFPEAWHSDAAAVHGDGVFSVRSKVYVSPKLWYLRVNVIEAQDVEAAEAAPVFVKGQVGNQVCKTKLFPNRTANPVWNEDLL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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