当前解析结果
SmilChr06G001956| 统一新 Gene ID | SmilChr06G001956 |
|---|---|
| 名称 | SmilChr06G001956 |
| 描述 | uncharacterized SmilChr06G001956 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 24268004 - 24271917 / + |
| NCBI Gene ID | LOC130988931 |
|---|---|
| GeneID | 130988931 |
| locus_tag | - |
| NCBI Name | LOC130988931 |
| 原始查询 | LOC130988931 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | M28 Zn-peptidase nicastrin [Source:NCBI gene (formerly Entrezgene);Acc:823558]; symbol=AT3G44330; hit=AT3G44330; species=arabidopsis; confidence=low |
| 产物 | M28 Zn-peptidase nicastrin [Source:NCBI gene (formerly Entrezgene);Acc:823558]; symbol=AT3G44330; hit=AT3G44330; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G44330 (AT3G44330)M28 Zn-peptidase nicastrin [Source:NCBI gene (formerly Entrezgene);Acc:823558] identity=75.7; qcov=0.336; evalue=2.31e-12; confidence=low |
| Rice | Os08g0102100- identity=73; qcov=0.336; evalue=4.54e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988931 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057768904.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057768902.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057768907.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057768902.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057768902.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:24268468 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B65,C16 |
Chr6:24268479 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:24268483 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr6:24268490 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C50,C57 |
Chr6:24268508 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B6,C39,C67 |
Chr6:24268526 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A7,B127,B132,C30,C49 |
Chr6:24269374 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B132,B30,C36 |
Chr6:24269394 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
Chr6:24269396 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A2,C42 |
Chr6:24269403 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B48,C82 |
Chr6:24270338 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B117,B58,B7,C32,C69 |
Chr6:24271038 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C40,C50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
21 records
下载 cDNA FASTA5 records
下载 CDS FASTA5 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。