当前解析结果
SmilChr06G002074| 统一新 Gene ID | SmilChr06G002074 |
|---|---|
| 名称 | SmilChr06G002074 |
| 描述 | uncharacterized SmilChr06G002074 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 27344746 - 27345405 / + |
| NCBI Gene ID | LOC130988972 |
|---|---|
| GeneID | 130988972 |
| locus_tag | - |
| NCBI Name | LOC130988972 |
| 原始查询 | LOC130988972 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:839195]; symbol=AT1G26550; hit=AT1G26550; species=arabidopsis; confidence=high |
| 产物 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:839195]; symbol=AT1G26550; hit=AT1G26550; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G26550 (AT1G26550)FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:839195] identity=85.2; qcov=0.901; evalue=9.49e-79; confidence=high |
| Rice | Os09g0411700- identity=81.8; qcov=1.04; evalue=1.9e-74; confidence=high |
| GO | GO:0003677 (DNA binding); GO:0003755 (peptidyl-prolyl cis-trans isomerase activity); GO:0006364 (rRNA processing) |
| KEGG | - |
| Pfam | PF00639 (Rotamase); PF13616 (Rotamase_3) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988972 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057768941.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057768941.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057768941.1 |
| 4 | Nucleoplasm | 核质 | 0.20000 | XP_057768941.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057768941.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057768941.1PF13616
Rotamase_3 42-135 aa
PF00639
Rotamase 47-136 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057768941.1 |
Pfam | PF13616 |
Rotamase_3 | Domain | 42 | 135 | 1.2e-16 | 62.0 | PPIC-type PPIASE domain |
XP_057768941.1 |
Pfam | PF00639 |
Rotamase | Domain | 47 | 136 | 5.8e-18 | 66.4 | PPIC-type PPIASE domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。