当前解析结果
SmilChr06G002090| 统一新 Gene ID | SmilChr06G002090 |
|---|---|
| 名称 | SmilChr06G002090 |
| 描述 | uncharacterized SmilChr06G002090 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 27660404 - 27661952 / + |
| NCBI Gene ID | LOC130988984 |
|---|---|
| GeneID | 130988984 |
| locus_tag | - |
| NCBI Name | LOC130988984 |
| 原始查询 | LOC130988984 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836837]; symbol=AT5G67020; hit=AT5G67020; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836837]; symbol=AT5G67020; hit=AT5G67020; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G67020 (AT5G67020)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836837] identity=66.3; qcov=1.01; evalue=1.43e-179; confidence=high |
| Rice | Os08g0472400- identity=53.1; qcov=1.02; evalue=3e-124; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988984 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057768956.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057768956.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057768956.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057768956.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057768956.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:27660583 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A3,B66,B75,B98 |
Chr6:27660622 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A3,B66,B98 |
Chr6:27660665 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C30 |
Chr6:27660775 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr6:27660971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B135,B82,B84,B95 |
Chr6:27660985 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B123,B135,B82,B84,B95 |
Chr6:27660987 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A3,B66 |
Chr6:27661003 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B123,B135,B82,B84,B95 |
Chr6:27661012 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B135,B75,B82,B84,B95 |
Chr6:27661022 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B135,B82,B84,B95 |
Chr6:27661033 |
GC |
G |
1bp_deletion | frameshift_variant | 3 | B82,B84,B95 |
Chr6:27661033 |
GC |
G |
1bp_deletion | CDS_variant | 3 | B82,B84,B95 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。