Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G002130`

染色体: Chr06 坐标: 28683601-28693402 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G002130`
名称	SmilChr06G002130
描述	uncharacterized SmilChr06G002130
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	28683601 - 28693402 / `+`

ID 对照

NCBI Gene ID	`LOC130989012`
GeneID	`130989012`
locus_tag	`-`
NCBI Name	`LOC130989012`
原始查询	`LOC130989012`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824199]; symbol=AT3G50370; hit=AT3G50370; species=arabidopsis; confidence=medium
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824199]; symbol=AT3G50370; hit=AT3G50370; species=arabidopsis; confidence=medium
Arabidopsis	`AT3G50370` (AT3G50370) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824199] identity=40.2; qcov=0.936; evalue=0; confidence=medium
Rice	`Os03g0395600` - identity=40.4; qcov=0.303; evalue=2.28e-112; confidence=low
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130989012

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057768991.1`
2	Cytoplasmic granule	细胞质颗粒	0.80000	`XP_057768991.1`
3	Cytoplasmic ribonucleoprotein granule	Cytoplasmic ribonucleoprotein granule	0.80000	`XP_057768991.1`
4	Nucleus	细胞核	0.60000	`XP_057768991.1`
5	P-body	P-body	0.60000	`XP_057768991.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:28684325`	`ACG`	`A`	2bp_deletion	frameshift_variant	1	B86
`Chr6:28684325`	`ACG`	`A`	2bp_deletion	CDS_variant	1	B86
`Chr6:28684416`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:28684577`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B137,B55,C2
`Chr6:28684604`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B12,B137,B55,C2
`Chr6:28685299`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A2,B80
`Chr6:28685979`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B46,D5
`Chr6:28686275`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C51
`Chr6:28686592`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A1
`Chr6:28686594`	`C`	`T`	EMS_canonical_SNV	stop_gained	21	A7,B1,B119,B22,B23,B30,B34,B37,B41,B44,B48,B58,B61,B7,B81,B91,C15,C25,C5,C71,C80
`Chr6:28686949`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B26,B57
`Chr6:28687047`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B133,B53,B64,C6

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057913008.1
CTTTTGTTGAAAACGGAAAAAAAAGAAATAGGAAAATGAAAACAAAATCAAGCACACTCTCGCTCTCGCAATCTATGAATCTGTAATCTGTCTCTCCCTCAGACTAAAGTACGCAGTAGGGCTTCTCTCTCTCCCCCTCTCAGCAAGGCGCACGTTATTAACTTGCTGCCTTTTTATCGTACGCCATTTCGAGCGAGATCTGTTCAGGGCAACTGTCGATTCATTTATTTTGATTGTTGTGGAAGGGGAGCCGTAGAGTG...

XM_057913009.1
CTTTTGTTGAAAACGGAAAAAAAAGAAATAGGAAAATGAAAACAAAATCAAGCACACTCTCGCTCTCGCAATCTATGAATCTGTAATCTGTCTCTCCCTCAGACTAAAGTACGCAGTAGGGCTTCTCTCTCTCCCCCTCTCAGCAAGGCGCACGTTATTAACTTGCTGCCTTTTTATCGTACGCCATTTCGAGCGAGATCTGTTCAGGGCAACTGTCGATTCATTTATTTTGATTGTTGTGGAAGGGGAGCCGTAGAGTG...

CDS

2 records

下载 CDS FASTA

LOC130989012
ATGGCCAATCATGGCTCTAAGTTTGTATCCGTGAATCTGAACAAGTCGTATGGGCAGCAACATCATAGCCATTACACACATTTTAATGGAGGCAGCGGCTCCTATGGGCAGGTGCCTGGAACTGCTGGACGGGGGCGGGTCGGGGTTGGAGGTGGTGGAGGGATGTTGGTTTTATCTAGGGGACGAGGAGGTGCCCCCAAGGTTGCTCCAAAATTATCTGTTCCGCCTCCTTTGAATTTGCCGTCGTTGAGGAAAGAACA...

Protein

2 records

下载 Protein FASTA

XP_057768991.1
MANHGSKFVSVNLNKSYGQQHHSHYTHFNGGSGSYGQVPGTAGRGRVGVGGGGGMLVLSRGRGGAPKVAPKLSVPPPLNLPSLRKEHEKFDTTGPGGPGASAGTGSGSRPSSSGVGWSKPIAAATALPEKIDSGADTPGVNGMSDAAGASRVGSYMPPSARSAGVGVVGSASASREFVPSAEKAMLLKGEDFPSLQAARPVSSGASQKQKDGLNQKQKQVLHEDLTQDKEESYHLGPMADMHPPGQSLGNTGGNRLVENG...

XP_057768992.1
MANHGSKFVSVNLNKSYGQQHHSHYTHFNGGSGSYGQVPGTAGRGRVGVGGGGGMLVLSRGRGGAPKVAPKLSVPPPLNLPSLRKEHEKFDTTGPGGPGASAGTGSGSRPSSSGVGWSKPIAAATALPEKIDSGADTPGVNGMSDAAGASRVGSYMPPSARSAGVGVVGSASASREFVPSAEKAMLLKGEDFPSLQAARPVSSGASQKQKDGLNQKQKQVLHEDLTQDKEESYHLGPMADMHPPGQSLGNTGGNRLVENG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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