当前解析结果
SmilChr06G002377| 统一新 Gene ID | SmilChr06G002377 |
|---|---|
| 名称 | SmilChr06G002377 |
| 描述 | uncharacterized SmilChr06G002377 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 34622784 - 34626142 / - |
| NCBI Gene ID | LOC130989199 |
|---|---|
| GeneID | 130989199 |
| locus_tag | - |
| NCBI Name | LOC130989199 |
| 原始查询 | LOC130989199 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | integral membrane hemolysin-III-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829985]; symbol=AT4G38280; hit=AT4G38280; species=arabidopsis; confidence=medium |
| 产物 | integral membrane hemolysin-III-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829985]; symbol=AT4G38280; hit=AT4G38280; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G38280 (AT4G38280)integral membrane hemolysin-III-like protein [Source:NCBI gene (formerly Entrezgene);Acc:829985] identity=35.5; qcov=0.707; evalue=2.07e-21; confidence=medium |
| Rice | Os09g0549400- identity=49.2; qcov=0.247; evalue=9.23e-14; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989199 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057769124.1 |
| 2 | Chromosome | 染色体 | 0.20000 | XP_057769124.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057769124.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057769124.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057769124.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:34623186 |
C |
T |
EMS_canonical_SNV | stop_gained | 39 | A19,A20,A3,B100,B110,B113,B114,B12,B128,B13,B134,B137,B16,B29,B51,B55,B84,B86,C17,C18,C19,C2,C27,C35,C37,C44,C48,C53,C63,C64,C66,C81,C83,C9,D10,D11,D3,D6,D8 |
Chr6:34624128 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B139,B52,B82,C20,D4 |
Chr6:34624130 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C66 |
Chr6:34624138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A21,B101,C2,C32,C68 |
Chr6:34624315 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr6:34624822 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。