Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003025`

染色体: Chr01 坐标: 49303042-49308047 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003025`
名称	SmilChr01G003025
描述	bifunctional purple acid phosphatase 26-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	49303042 - 49308047 / `-`

ID 对照

NCBI Gene ID	`LOC130989207`
GeneID	`130989207`
locus_tag	`-`
NCBI Name	`LOC130989207`
原始查询	`LOC130989207`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	bifunctional purple acid phosphatase 26-like
产物	bifunctional purple acid phosphatase 26-like
Arabidopsis	`AT5G34850` (PAP26) purple acid phosphatase 26 [Source:NCBI gene (formerly Entrezgene);Acc:833406] identity=69.6; qcov=0.991; evalue=0; confidence=high
Rice	`Os06g0643900` (OsPAP26) - identity=67.9; qcov=0.951; evalue=0; confidence=high
GO	GO:0003993 (acid phosphatase activity); GO:0046872 (metal ion binding)
KEGG	-
Pfam	PF00149 (Metallophos); PF14008 (Metallophos_C); PF16656 (Pur_ac_phosph_N)
InterPro	-
eggNOG	-
NR	GeneID:130989207

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.60000	`XP_057769148.1`
2	Cell wall	细胞壁	0.40000	`XP_057769148.1`
3	Secreted	分泌到胞外	0.20000	`XP_057769148.1`
4	Nucleus	细胞核	0.00000	`XP_057769148.1`
5	Chromosome	染色体	0.00000	`XP_057769148.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:49304620`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B36,C60
`Chr1:49304621`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:49304627`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B7,C45
`Chr1:49304818`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:49304994`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr1:49305230`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B132
`Chr1:49305312`	`TCA`	`T`	2bp_deletion	frameshift_variant	1	B48
`Chr1:49305312`	`TCA`	`T`	2bp_deletion	CDS_variant	1	B48
`Chr1:49305568`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B114,C56,C81
`Chr1:49305601`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B139,B14,B57
`Chr1:49305618`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr1:49306022`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B117,B123,B83,C59,C65

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057769148.1

465 aa

232

465

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 54-145 aa PF00149 Metallophos 156-353 aa PF14008 Metallophos_C 379-437 aa

XP_057769152.1

465 aa

232

465

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 54-145 aa PF00149 Metallophos 156-353 aa PF14008 Metallophos_C 379-437 aa

XP_057769157.1

465 aa

232

465

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 54-145 aa PF00149 Metallophos 156-353 aa PF14008 Metallophos_C 379-437 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057769148.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	54	145	7.6e-22	78.4	Purple acid Phosphatase, N-terminal domain
`XP_057769148.1`	Pfam	`PF00149`	Metallophos	Domain	156	353	1.5e-24	88.3	Calcineurin-like phosphoesterase
`XP_057769148.1`	Pfam	`PF14008`	Metallophos_C	Domain	379	437	6e-17	62.8	Iron/zinc purple acid phosphatase-like protein C
`XP_057769152.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	54	145	7.6e-22	78.4	Purple acid Phosphatase, N-terminal domain
`XP_057769152.1`	Pfam	`PF00149`	Metallophos	Domain	156	353	1.5e-24	88.3	Calcineurin-like phosphoesterase
`XP_057769152.1`	Pfam	`PF14008`	Metallophos_C	Domain	379	437	6e-17	62.8	Iron/zinc purple acid phosphatase-like protein C
`XP_057769157.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	54	145	7.6e-22	78.4	Purple acid Phosphatase, N-terminal domain
`XP_057769157.1`	Pfam	`PF00149`	Metallophos	Domain	156	353	1.5e-24	88.3	Calcineurin-like phosphoesterase
`XP_057769157.1`	Pfam	`PF14008`	Metallophos_C	Domain	379	437	6e-17	62.8	Iron/zinc purple acid phosphatase-like protein C

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057913174.1
TTTTGATTAATCTATATATGATTTTGATTGCTATAGGTTCTTAAATTACCAGAAGCTTTTGATTTTGAATTCAAATGTTGAAGGCTATATCAATTTAGTGAGCGACTGAGGTTTTAAGGAACAAGCAATGCTGATTGAACTACTACTGCTTTTCTCATCTGTTGCGTTGAGCTGCGTTTGCAATGGCAATGCCGGTGTGACTAGTGCATTTGTACGCAATGAGTGGCCATCACTCGATATCTCTTTAGACGATCAAGTTA...

XM_057913169.1
AAACTACCTATTTCAGGAACAAGCAATGCTGATTGAACTACTACTGCTTTTCTCATCTGTTGCGTTGAGCTGCGTTTGCAATGGCAATGCCGGTGTGACTAGTGCATTTGTACGCAATGAGTGGCCATCACTCGATATCTCTTTAGACGATCAAGTTATTGCAGCGCCTAAAGGTTACAATGCACCGCAACAGGTTCACATCACACAGGGCGACTATGATGGGAAGGCTGTGATCATTTCATGGATTACAGCTGATGGGC...

CDS

3 records

下载 CDS FASTA

LOC130989207
ATGCTGATTGAACTACTACTGCTTTTCTCATCTGTTGCGTTGAGCTGCGTTTGCAATGGCAATGCCGGTGTGACTAGTGCATTTGTACGCAATGAGTGGCCATCACTCGATATCTCTTTAGACGATCAAGTTATTGCAGCGCCTAAAGGTTACAATGCACCGCAACAGGTTCACATCACACAGGGCGACTATGATGGGAAGGCTGTGATCATTTCATGGATTACAGCTGATGGGCCGGGCTCCAACAAAGTTCGATATGG...

Protein

3 records

下载 Protein FASTA

XP_057769148.1
MLIELLLLFSSVALSCVCNGNAGVTSAFVRNEWPSLDISLDDQVIAAPKGYNAPQQVHITQGDYDGKAVIISWITADGPGSNKVRYGLADGEYHLTVEGTLQNYTFSNYTSGYIHHCLVDGLQFDTKYYYEIEGGNSSRRFWFRTPPPIHPDAPYKFGIIGDLGQTYNSLSTLEHSIQLGEETILYVGDLSYADRYQYRDVGIRWDSWGRLAERSAAYQPWIWVAGNHEIEYFPYMGEVIPFRNYIYRYPTPYRYSGSSN...

XP_057769152.1
MLIELLLLFSSVALSCVCNGNAGVTSAFVRNEWPSLDISLDDQVIAAPKGYNAPQQVHITQGDYDGKAVIISWITADGPGSNKVRYGLADGEYHLTVEGTLQNYTFSNYTSGYIHHCLVDGLQFDTKYYYEIEGGNSSRRFWFRTPPPIHPDAPYKFGIIGDLGQTYNSLSTLEHSIQLGEETILYVGDLSYADRYQYRDVGIRWDSWGRLAERSAAYQPWIWVAGNHEIEYFPYMGEVIPFRNYIYRYPTPYRYSGSSN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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