当前解析结果
SmilChr01G003052| 统一新 Gene ID | SmilChr01G003052 |
|---|---|
| 名称 | SmilChr01G003052 |
| 描述 | uncharacterized SmilChr01G003052 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 49470488 - 49472250 / - |
| NCBI Gene ID | LOC130989625 |
|---|---|
| GeneID | 130989625 |
| locus_tag | - |
| NCBI Name | LOC130989625 |
| 原始查询 | LOC130989625 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838255]; symbol=AT1G16840; hit=AT1G16840; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838255]; symbol=AT1G16840; hit=AT1G16840; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G16840 (AT1G16840)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838255] identity=40; qcov=0.636; evalue=4.9e-23; confidence=medium |
| Rice | Os08g0230000- identity=35.2; qcov=0.758; evalue=3.75e-20; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989625 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057769637.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057769637.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057769637.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057769637.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057769637.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:49471782 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B5,C40 |
Chr1:49471891 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr1:49471894 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr1:49472023 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B129,C83 |
Chr1:49472086 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B61,C43 |
Chr1:49472157 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B8,C57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。