Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G002890`

染色体: Chr06 坐标: 41758635-41761296 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G002890`
名称	SmilChr06G002890
描述	EID1-like F-box protein 2
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	41758635 - 41761296 / `+`

ID 对照

NCBI Gene ID	`LOC130989644`
GeneID	`130989644`
locus_tag	`-`
NCBI Name	`LOC130989644`
原始查询	`LOC130989644`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	EID1-like F-box protein 2
产物	EID1-like F-box protein 2
Arabidopsis	`AT5G39360` (EDL2) EID1-like 2 [Source:NCBI gene (formerly Entrezgene);Acc:833932] identity=77.3; qcov=0.969; evalue=1.47e-146; confidence=high
Rice	`Os07g0598200` (Os_F0793) - identity=75.5; qcov=0.961; evalue=4.63e-147; confidence=high
GO	GO:0005515 (protein binding)
KEGG	-
Pfam	PF27778 (EID2_C)
InterPro	-
eggNOG	-
NR	GeneID:130989644

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.80000	`XP_057769659.1`
2	Nucleus	细胞核	0.80000	`XP_057769660.1`
3	Chromosome	染色体	0.00000	`XP_057769659.1`
4	Centromere	着丝粒	0.00000	`XP_057769659.1`
5	Chromatin	染色质	0.00000	`XP_057769659.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:41760202`	`C`	`T`	EMS_canonical_SNV	stop_gained	88	A15,A16,A19,A2,A20,A22,A7,A8,B1,B10,B101,B102,B103,B104,B107,B113,B118,B120,B121,B132,B134,B139,B15,B16,B19,B23,B28,B3,B31,B33,B34,B39,B4,B48,B52,B54,B57,B61,B62,B63,B68,B70,B73,B77,B78,B80,B83,B88,B89,B93,B94,B95,B96,B98,B99,C10,C11,C12,C13,C18,C2,C21,C22,C27,C30,C32,C33,C40,C41,C50,C52,C58,C6,C61,C64,C67,C69,C70,C72,C73,C8,C84,C85,C86,C87,D1,D3,D9
`Chr6:41760254`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C23
`Chr6:41760507`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C52
`Chr6:41760530`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B86
`Chr6:41760558`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B46
`Chr6:41760603`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B106,B46,C35
`Chr6:41760789`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A1
`Chr6:41760837`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A1
`Chr6:41760876`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C22
`Chr6:41760897`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C41,C48

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057769659.1

284 aa

142

284

EID2_C

PF27778 EID2_C 147-271 aa

XP_057769660.1

255 aa

128

255

EID2_C

PF27778 EID2_C 118-242 aa

XP_057769661.1

255 aa

128

255

EID2_C

PF27778 EID2_C 118-242 aa

XP_057769662.1

255 aa

128

255

EID2_C

PF27778 EID2_C 118-242 aa

XP_057769663.1

255 aa

128

255

EID2_C

PF27778 EID2_C 118-242 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057769659.1`	Pfam	`PF27778`	EID2_C	Domain	147	271	4.8e-53	179.2	EID1-like F-box protein 2 C-terminal domain
`XP_057769660.1`	Pfam	`PF27778`	EID2_C	Domain	118	242	2.9e-53	179.9	EID1-like F-box protein 2 C-terminal domain
`XP_057769661.1`	Pfam	`PF27778`	EID2_C	Domain	118	242	2.9e-53	179.9	EID1-like F-box protein 2 C-terminal domain
`XP_057769662.1`	Pfam	`PF27778`	EID2_C	Domain	118	242	2.9e-53	179.9	EID1-like F-box protein 2 C-terminal domain
`XP_057769663.1`	Pfam	`PF27778`	EID2_C	Domain	118	242	2.9e-53	179.9	EID1-like F-box protein 2 C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057913679.1
TCACCTAACCATCACGCCTCCAGATATCCAAATAAGCACACAAAAATTGATTTGAATATATAAAATCCATTTAACGCCACTCATTGGTTCGTTTTCAAGATTAAATAACAGTAGAGTGTTTTTATTAGTATTCATTTTGTTACAGTGGAATTTACACCTATTTATTTTGTTATTTTCATTCCGCATTATTAGCTGCGCGCAACGCTTCTGGAACTGAAGATTGGATTTTTCTTTTCTGGGCCTGCGCTTCTTCTTGTTAC...

XM_057913677.1
GTTTTCAAGATTAAATAACAGTAGAGTGTTTTTATTAGTATTCATTTTGTTACAGTGGAATTTACACCTATTTATTTTGTTATTTTCATTCCGCATTATTAGCTGCGCGCAACGCTTCTGGAACTGAAGATTGGATTTTTCTTTTCTGGGCCTGCGCTTCTTCTTGTTACAAGCTGAAATTTGTGGACTTATGATGAAGTAGGGTGGCCTTTGAACTGAGGCATCACCGAAATTTGCAGGCATTAATATCGAAGCTCGCT...

CDS

5 records

下载 CDS FASTA

LOC130989644
ATGCACCTTCCCACCTCATTAACCCCTCTTTTGTTCTCTTTGTTGGGGCATCACCGAAATTTGCAGGCATTAATATCGAAGCTCGCTATGACTGTATGTTTCGGTCGAACAATGAATATCACAAAGCAATACCGCTGCATACACTCTGCAACCTGTGTTTGTACCAAAGGGCACCTTAGTGAAGAAGTGATCTTCTTAGTTTTCAACCATTTGAATTGGAACCCTAAGTTGATTGTGGCCCTTTCTTGTACGTGCAAATG...

LOC130989644
ATGACTGTATGTTTCGGTCGAACAATGAATATCACAAAGCAATACCGCTGCATACACTCTGCAACCTGTGTTTGTACCAAAGGGCACCTTAGTGAAGAAGTGATCTTCTTAGTTTTCAACCATTTGAATTGGAACCCTAAGTTGATTGTGGCCCTTTCTTGTACGTGCAAATGGTTAGACGATCTTGCCAAACGAGTCCTCTGGAAGGAGTTTTGCAAGACTCGGGCTCCTAAGATGATGCTCGATCTGCACTCCAGCGG...

Protein

5 records

下载 Protein FASTA

XP_057769659.1
MHLPTSLTPLLFSLLGHHRNLQALISKLAMTVCFGRTMNITKQYRCIHSATCVCTKGHLSEEVIFLVFNHLNWNPKLIVALSCTCKWLDDLAKRVLWKEFCKTRAPKMMLDLHSSGNHIVDGNWSALGKLLIYCSGCKKDGLFNRVHVPGHFVYRTRFSRTSGKSFLLPQCRTDILYVSDPCEHLDQGDEGDIGFFRGIFKSFATSKVRKLLISRCAPLHPTEVCPYCKAKLWNMQEANMIPSSASCRLGAYEDCIEYFV...

XP_057769660.1
MTVCFGRTMNITKQYRCIHSATCVCTKGHLSEEVIFLVFNHLNWNPKLIVALSCTCKWLDDLAKRVLWKEFCKTRAPKMMLDLHSSGNHIVDGNWSALGKLLIYCSGCKKDGLFNRVHVPGHFVYRTRFSRTSGKSFLLPQCRTDILYVSDPCEHLDQGDEGDIGFFRGIFKSFATSKVRKLLISRCAPLHPTEVCPYCKAKLWNMQEANMIPSSASCRLGAYEDCIEYFVCLNGHVLGICTLLPLSDTDEAAEE

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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