当前解析结果
SmilChr06G002922| 统一新 Gene ID | SmilChr06G002922 |
|---|---|
| 名称 | SmilChr06G002922 |
| 描述 | uncharacterized SmilChr06G002922 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 42080580 - 42087228 / - |
| NCBI Gene ID | LOC130989665 |
|---|---|
| GeneID | 130989665 |
| locus_tag | - |
| NCBI Name | LOC130989665 |
| 原始查询 | LOC130989665 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | dentin sialophosphoprotein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830692]; symbol=AT5G07980; hit=AT5G07980; species=arabidopsis; confidence=weak |
| 产物 | dentin sialophosphoprotein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830692]; symbol=AT5G07980; hit=AT5G07980; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G07980 (AT5G07980)dentin sialophosphoprotein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830692] identity=38.1; qcov=0.292; evalue=7.44e-49; confidence=weak |
| Rice | Os03g0213300- identity=31.7; qcov=0.285; evalue=1.95e-41; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989665 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057769687.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057769687.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057769687.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057769687.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057769687.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:42081012 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
Chr6:42081063 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr6:42081108 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr6:42081544 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr6:42081685 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B128,C19 |
Chr6:42081704 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B57,B90,B92,C61 |
Chr6:42082356 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B52 |
Chr6:42082374 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A10 |
Chr6:42082393 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr6:42082466 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr6:42082650 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B104,B131,D11 |
Chr6:42082682 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。