当前解析结果
SmilChr06G002938| 统一新 Gene ID | SmilChr06G002938 |
|---|---|
| 名称 | SmilChr06G002938 |
| 描述 | uncharacterized SmilChr06G002938 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 42200097 - 42203851 / + |
| NCBI Gene ID | LOC130989676 |
|---|---|
| GeneID | 130989676 |
| locus_tag | - |
| NCBI Name | LOC130989676 |
| 原始查询 | LOC130989676 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | myb-like protein Q [Source:NCBI gene (formerly Entrezgene);Acc:833915]; symbol=AT5G39200; hit=AT5G39200; species=arabidopsis; confidence=low |
| 产物 | myb-like protein Q [Source:NCBI gene (formerly Entrezgene);Acc:833915]; symbol=AT5G39200; hit=AT5G39200; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G39200 (AT5G39200)myb-like protein Q [Source:NCBI gene (formerly Entrezgene);Acc:833915] identity=31.1; qcov=0.755; evalue=2.71e-16; confidence=low |
| Rice | Os07g0298100- identity=33.5; qcov=0.59; evalue=2.89e-10; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989676 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057769708.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057769708.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057769708.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057769708.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057769708.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:42202653 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,A3,D11 |
Chr6:42202768 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:42202965 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B62,C3 |
Chr6:42203013 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:42203043 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:42203060 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:42203067 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A25,B132,C50 |
Chr6:42203209 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr6:42203236 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B12,B137,B55,C2,D2 |
Chr6:42203409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C86 |
Chr6:42203481 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
Chr6:42203516 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A19,B107,C5 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。