Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G002999`

染色体: Chr06 坐标: 42869906-42874654 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G002999`
名称	SmilChr06G002999
描述	uncharacterized SmilChr06G002999
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	42869906 - 42874654 / `-`

ID 对照

NCBI Gene ID	`LOC130989734`
GeneID	`130989734`
locus_tag	`-`
NCBI Name	`LOC130989734`
原始查询	`LOC130989734`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822739]; symbol=AT3G30380; hit=AT3G30380; species=arabidopsis; confidence=high
产物	alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822739]; symbol=AT3G30380; hit=AT3G30380; species=arabidopsis; confidence=high
Arabidopsis	`AT3G30380` (AT3G30380) alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822739] identity=72; qcov=1.02; evalue=0; confidence=high
Rice	`Os02g0190800` - identity=63.8; qcov=1.05; evalue=2.66e-169; confidence=high
GO	-
KEGG	-
Pfam	PF00561 (Abhydrolase_1); PF01738 (DLH); PF03959 (FSH1); PF12146 (Hydrolase_4)
InterPro	-
eggNOG	-
NR	GeneID:130989734

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057769797.1`
2	Cytoplasm	细胞质	0.20000	`XP_057769797.1`
3	Cell projection	细胞突起	0.20000	`XP_057769797.1`
4	Cytosol	细胞质基质	0.20000	`XP_057769799.1`
5	Axon	Axon	0.20000	`XP_057769797.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:42871440`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:42874087`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B21,B34,C29,C59,D4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057769797.1

377 aa

188

377

Hydrolase_4

Abhydrolase_1

DLH

FSH1

PF12146 Hydrolase_4 67-174 aa PF00561 Abhydrolase_1 70-170 aa PF01738 DLH 112-228 aa PF03959 FSH1 159-238 aa

XP_057769798.1

377 aa

188

377

Hydrolase_4

Abhydrolase_1

DLH

FSH1

PF12146 Hydrolase_4 67-174 aa PF00561 Abhydrolase_1 70-170 aa PF01738 DLH 112-228 aa PF03959 FSH1 159-238 aa

XP_057769799.1

358 aa

179

358

Hydrolase_4

Abhydrolase_1

DLH

FSH1

PF12146 Hydrolase_4 67-174 aa PF00561 Abhydrolase_1 70-170 aa PF01738 DLH 112-228 aa PF03959 FSH1 159-238 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057769797.1`	Pfam	`PF12146`	Hydrolase_4	Domain	67	174	2.2e-12	47.5	Serine aminopeptidase, S33
`XP_057769797.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	70	170	1.1e-09	39.1	alpha/beta hydrolase fold
`XP_057769797.1`	Pfam	`PF01738`	DLH	Domain	112	228	0.00014	22.2	Dienelactone hydrolase family
`XP_057769797.1`	Pfam	`PF03959`	FSH1	Domain	159	238	9e-05	23.0	Serine hydrolase (FSH1)
`XP_057769798.1`	Pfam	`PF12146`	Hydrolase_4	Domain	67	174	2.2e-12	47.5	Serine aminopeptidase, S33
`XP_057769798.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	70	170	1.1e-09	39.1	alpha/beta hydrolase fold
`XP_057769798.1`	Pfam	`PF01738`	DLH	Domain	112	228	0.00014	22.2	Dienelactone hydrolase family
`XP_057769798.1`	Pfam	`PF03959`	FSH1	Domain	159	238	9e-05	23.0	Serine hydrolase (FSH1)
`XP_057769799.1`	Pfam	`PF12146`	Hydrolase_4	Domain	67	174	1.9e-12	47.8	Serine aminopeptidase, S33
`XP_057769799.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	70	170	9.1e-10	39.3	alpha/beta hydrolase fold
`XP_057769799.1`	Pfam	`PF01738`	DLH	Domain	112	228	0.00014	22.3	Dienelactone hydrolase family
`XP_057769799.1`	Pfam	`PF03959`	FSH1	Domain	159	238	8.3e-05	23.1	Serine hydrolase (FSH1)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057913815.1
CTCGTCCATTATCCAACTGCCACGTGTCAGTAGAATCGCTGTACGCGAAATCGACGATTTAAAGTCGGGATAAGGTGCACGGGATCACCGTACACCCTCCGATGCGATCATCATTGGAGGTCACACGTGCCACCATCCACTTTAACGGCGGAAATCCATCCTTCTCCCTTTCAAAATTACACACACAAACACGCACCTTTACATATAGCTTCCCCCTGTATCTATCCCGTTATACATTCTCGCAAGCATCAATAATTGAA...

XM_057913814.1
GTCCATTATCCAACTGCCACGTGTCAGTAGAATCGCTGTACGCGAAATCGACGATTTAAAGTCGGGATAAGGTGCACGGGATCACCGTACACCCTCCGATGCGATCATCATTGGAGGTCACACGTGCCACCATCCACTTTAACGGCGGAAATCCATCCTTCTCCCTTTCAAAATTACACACACAAACACGCACCTTTACATATAGCTTCCCCCTGTATCTATCCCGTTATACATTCTCGCAAGCATCAATAATTGAACCT...

CDS

3 records

下载 CDS FASTA

LOC130989734
ATGGGGGCGGTGACGTCGTCGATGGCGGCGAAGTTTGCATTTTTTCCGCCGAATCCGGCGTCGTACGGGGTGACGGTGGAGGAGACGGGGAAGCTAAGGATGACGGAGGTGGCGAACCACGAGAACGTCGACGTTTTGAAAGTGAAGACGAAGAGGGGGACGGAGATCGTGGCGGTGTACGTGAAGAATCCGACGGCGAAGCTGACGCTGTTGTACTCGCACGGGAACGCGGCTGATCTAGGGCAGATGTATGATCTCTT...

Protein

3 records

下载 Protein FASTA

XP_057769797.1
MGAVTSSMAAKFAFFPPNPASYGVTVEETGKLRMTEVANHENVDVLKVKTKRGTEIVAVYVKNPTAKLTLLYSHGNAADLGQMYDLFSELSFHLRVNLMGYDYSGYGQSTGKPSEQNTYADIEAAYACLKETYGVKEEDIILYGQSVGSGPTLDFASRLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVQCPVLVIHGTEDDVVDCSHGKQLWELCKEKYEPLWVKGGNHCDLELYPEYIKHLKKFILAV...

XP_057769798.1
MGAVTSSMAAKFAFFPPNPASYGVTVEETGKLRMTEVANHENVDVLKVKTKRGTEIVAVYVKNPTAKLTLLYSHGNAADLGQMYDLFSELSFHLRVNLMGYDYSGYGQSTGKPSEQNTYADIEAAYACLKETYGVKEEDIILYGQSVGSGPTLDFASRLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVQCPVLVIHGTEDDVVDCSHGKQLWELCKEKYEPLWVKGGNHCDLELYPEYIKHLKKFILAV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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