Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003076`

染色体: Chr01 坐标: 49599479-49603293 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003076`
名称	SmilChr01G003076
描述	uncharacterized SmilChr01G003076
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	49599479 - 49603293 / `+`

ID 对照

NCBI Gene ID	`LOC130989798`
GeneID	`130989798`
locus_tag	`-`
NCBI Name	`LOC130989798`
原始查询	`LOC130989798`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	phospholipase A I-like protein [Source:NCBI gene (formerly Entrezgene);Acc:842482]; symbol=AT1G61850; hit=AT1G61850; species=arabidopsis; confidence=weak
产物	phospholipase A I-like protein [Source:NCBI gene (formerly Entrezgene);Acc:842482]; symbol=AT1G61850; hit=AT1G61850; species=arabidopsis; confidence=weak
Arabidopsis	`AT1G61850` (AT1G61850) phospholipase A I-like protein [Source:NCBI gene (formerly Entrezgene);Acc:842482] identity=82.1; qcov=0.157; evalue=1.4e-06; confidence=weak
Rice	`Os07g0520900` (OspPLAI) - identity=88.5; qcov=0.146; evalue=3.63e-06; confidence=weak
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130989798

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057769911.1`
2	Cytoplasm	细胞质	0.80000	`XP_057769880.1`
3	Chloroplast	叶绿体	0.60000	`XP_057769920.1`
4	Cytosol	细胞质基质	0.20000	`XP_057769980.1`
5	Chromosome	染色体	0.00000	`XP_057769880.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:49600295`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A20
`Chr1:49600328`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:49600517`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C74
`Chr1:49600544`	`TC`	`T`	1bp_deletion	frameshift_variant	3	A13,C1,C86
`Chr1:49600544`	`TC`	`T`	1bp_deletion	CDS_variant	3	A13,C1,C86
`Chr1:49600990`	`A`	`AG`	1bp_insertion	frameshift_variant	2	B75,D11
`Chr1:49600990`	`A`	`AG`	1bp_insertion	CDS_variant	2	B75,D11
`Chr1:49601006`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C52
`Chr1:49601048`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A3
`Chr1:49601238`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B103,B37
`Chr1:49601260`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr1:49601266`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B12,B130,B36,B82,B86

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

20 records

下载 cDNA FASTA

XR_009090777.1
GTTTTTACAAAAAAACGCAGTGAATCAGTGCAAAAACGCAACGCACATTCCCGCCTCTTTCTTCAGCCTTACAATTTTTTTTCGTTTTGCGTGATATATGTAAGTATTCTGTGGTGCATGTGCCATCAGCCTTTTTACTCTCTTTCCTTCACTTTTCACGCAAAAAGGCGTCTGACACCATTTATTACTCATTTTTCTCTCTCTCTCTCTCTCTCTTACTTTAGGTCTCCTCATTTCTTTCTCATTTTTTTTTTCTCTAC...

XR_009090768.1
CAAAAAAACGCAGTGAATCAGTGCAAAAACGCAACGCACATTCCCGCCTCTTTCTTCAGCCTTACAATTTTTTTTCGTTTTGCGTGATATATGTAAGTATTCTGTGGTGCATGTGCCATCAGCCTTTTTACTCTCTTTCCTTCACTTTTCACGCAAAAAGGCGTCTGACACCATTTATTACTCATTTTTCTCTCTCTCTCTCTCTCTCTTACTTTAGGTCTCCTCATTTCTTTCTCATTTTTTTTTTCTCTACAATCCTC...

CDS

14 records

下载 CDS FASTA

LOC130989798
ATGTTATTCTTTGTTCATTCATTTATTTCAGTTTGCGATAGTATTAAAGCTCAGAACCGCTCTTCCACCGTGGAAACAAGAGATGTGCGAACTCAAGCAATGTATTGGCTATTGGATTCTGGGTTTATTGGTTTGATATGTTCCTGTTTCAGTGAAGATGTAGAGTCATCCATGAGTTCTTCAGATAATGCAATTGCGGTGTTTGGTTCTTCCAAAGGAGAAACTATGGAACAATACACTGGAGATTCGGAGGTAGCTGG...

LOC130989798
ATGATGTTTAAATTGAGTGGCTGCAAGGATATGTTAAATGTGACCGTGGTTTTCACAGAAAGAAGATTGATTTTCGTTTTATTTTCTGAGTTGATGTTATTGGGATTTTCCTTTAGATTAGCTCTAATTTTTTTGTGTTGGGAACTTGCCATACCAGGCAGCCCCACATCTTCCTGTCATTCCCACTTGAGTAAGGATGTCTTCCTCATCTACTATTGTATATCATACTATTTTTCTGTGATTTCTGCAGATGTGCGAAC...

Protein

14 records

下载 Protein FASTA

XP_057769880.1
MMFKLSGCKDMLNVTVVFTERRLIFVLFSELMLLGFSFRLALIFLCWELAIPGSPTSSCHSHLSKDVFLIYYCISYYFSVISADVRTQAMYWLLDSGFIGLICSCFSEDVESSMSSSDNAIAVFGSSKGETMEQYTGDSEVAGRASKEMEFSLIHHPLKPNFFHHSLSSLPAARKRCSYRNTASLGCHCLSSSLELHFQNEEWEALLSCLIAASCFGDFQAPLKKSVGPTRRSPLDGNDAPERRVCKAAARALAILGENE...

XP_057769887.1
MMFKLSGCKDMLNVTVVFTERRLIFVLFSELMLLGFSFRLALIFLCWELAIPGSPTSSCHSHLSKDVFLIYYCISYYFSVISADVRTQAMYWLLDSGFIGLICSCFSEDVESSMSSSDNAIAVFGSSKGETMEQYTGDSEVAGRASKEMEFSLIHHPLKPNFFHHSLSSLPAARKRCSYRNTASLGCHCLSSSLELHFQNEEWEALLSCLIAASCFGDFQAPLKKSVGPTRRSPLDGNDAPERRVCKAAARALAILGENE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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