Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G003178`

染色体: Chr06 坐标: 44704511-44708582 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G003178`
名称	SmilChr06G003178
描述	uncharacterized SmilChr06G003178
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	44704511 - 44708582 / `-`

ID 对照

NCBI Gene ID	`LOC130989888`
GeneID	`130989888`
locus_tag	`-`
NCBI Name	`LOC130989888`
原始查询	`LOC130989888`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816884]; symbol=AT2G23520; hit=AT2G23520; species=arabidopsis; confidence=high
产物	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816884]; symbol=AT2G23520; hit=AT2G23520; species=arabidopsis; confidence=high
Arabidopsis	`AT2G23520` (AT2G23520) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816884] identity=64.6; qcov=1.02; evalue=0; confidence=high
Rice	`Os03g0765800` (OSJNBa0079B15.16) - identity=61.9; qcov=1.04; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130989888

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	0.40000	`XP_057770023.1`
2	Cell membrane	细胞膜	0.40000	`XP_057770024.1`
3	Endoplasmic reticulum	内质网	0.40000	`XP_057770024.1`
4	Lipid droplet	脂滴	0.20000	`XP_057770023.1`
5	Golgi apparatus	高尔基体	0.20000	`XP_057770024.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:44704917`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B23,B78,C32,C68
`Chr6:44705042`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:44705084`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C2,C32,C68
`Chr6:44705196`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B98
`Chr6:44705196`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B98
`Chr6:44705305`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D4
`Chr6:44705379`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A4,B13,C79
`Chr6:44705472`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A4,B34,B35,C79
`Chr6:44705541`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C59
`Chr6:44705569`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A18,B1,B27,C46,C69
`Chr6:44705600`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C32,C68
`Chr6:44705766`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057914040.1
AAGATTTGCGATAAACAACAGCATCGCCGAGAGTGAAAGTCAAACGTAAATTTGGTCACTGTGTTTTTGGTTAAGCGATTCCACAAATCACCCACTAGGGTCAACCTCAAATGAGGGAAGAGAGAGAGAGAGAGAGAGAAACAAGAGAGAGAGGATATATACTGCGAGAGGGGGTGAAGGTAATGAATATGGGTATGTTTCTTGATTCACGATTGAAGTAAATGTGCATTTGTTGCGGAGGGTCTGCCCCTTAATTGGTT...

XM_057914042.1
AACGTAAATTTGGTCACTGTGTTTTTGGTTAAGCGATTCCACAAATCACCCACTAGGGTCAACCTCAAATGAGGGAAGAGAGAGAGAGAGAGAGAGAAACAAGAGAGAGAGGATATATACTGCGAGAGGGGGTGAAGGTAATGAATATGGGTATGTTTCTTGATTCACGATTGAAGTAAATGTGCATTTGTTGCGGAGGGTCTGCCCCTTAATTGGTTTGCCCAAAGCCCAGAGAGAGAGATTGAGAGGAAAAGTGAGCT...

CDS

3 records

下载 CDS FASTA

LOC130989888
ATGTTTTCTCAAGAGAGAGAGGGAGAGGGGGAGAGAGAGAAAGAAGCTTTAATGCATCTCTCTCTATGGAAGCCATTGTCTCACTGTGCAGCTCTGCTCTTGGACAAGAAGAGCAGAAGAAGAGATGGGTCGGAGCATTCGGGCGAAGAAATTAAGGCGAACCCATCGACTCTGAGGAAGCTGCAAGAACACAAACTAAGGGAGGCTCTTGAAGAAGCATCTGAAGATGGATCCCTTGTTAAGTCGCAGGATATGGATTC...

LOC130989888
ATGCATCTCTCTCTATGGAAGCCATTGTCTCACTGTGCAGCTCTGCTCTTGGACAAGAAGAGCAGAAGAAGAGATGGGTCGGAGCATTCGGGCGAAGAAATTAAGGCGAACCCATCGACTCTGAGGAAGCTGCAAGAACACAAACTAAGGGAGGCTCTTGAAGAAGCATCTGAAGATGGATCCCTTGTTAAGTCGCAGGATATGGATTCTGAGATATTGGCCAACCAAGACGACGGCTTAGGCAGATCGCGGTCGCTGGC...

Protein

3 records

下载 Protein FASTA

XP_057770023.1
MFSQEREGEGEREKEALMHLSLWKPLSHCAALLLDKKSRRRDGSEHSGEEIKANPSTLRKLQEHKLREALEEASEDGSLVKSQDMDSEILANQDDGLGRSRSLARLNAQKEFLRATALAAERIFELADSIPQLNEAFNKFLTMYPKYQSSERIDQLRSDEYSHLCAAAAKVCLDYCGFGLFSLLQTIHYWESTTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFHT...

XP_057770024.1
MHLSLWKPLSHCAALLLDKKSRRRDGSEHSGEEIKANPSTLRKLQEHKLREALEEASEDGSLVKSQDMDSEILANQDDGLGRSRSLARLNAQKEFLRATALAAERIFELADSIPQLNEAFNKFLTMYPKYQSSERIDQLRSDEYSHLCAAAAKVCLDYCGFGLFSLLQTIHYWESTTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKRLLTMFDHESQSVNW...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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