当前解析结果
SmilChr06G003228| 统一新 Gene ID | SmilChr06G003228 |
|---|---|
| 名称 | SmilChr06G003228 |
| 描述 | uncharacterized SmilChr06G003228 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 45017852 - 45024547 / - |
| NCBI Gene ID | LOC130989937 |
|---|---|
| GeneID | 130989937 |
| locus_tag | - |
| NCBI Name | LOC130989937 |
| 原始查询 | LOC130989937 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | SWIM zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:842351]; symbol=AT1G60560; hit=AT1G60560; species=arabidopsis; confidence=high |
| 产物 | SWIM zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:842351]; symbol=AT1G60560; hit=AT1G60560; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G60560 (AT1G60560)SWIM zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:842351] identity=70.9; qcov=0.928; evalue=0; confidence=high |
| Rice | Os09g0309100- identity=64.7; qcov=0.934; evalue=0; confidence=high |
| GO | GO:0008270 (zinc ion binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989937 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057770095.1 |
| 2 | Chromosome | 染色体 | 0.20000 | XP_057770095.1 |
| 3 | Telomere | 端粒 | 0.20000 | XP_057770095.1 |
| 4 | Nucleoplasm | 核质 | 0.20000 | XP_057770097.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057770097.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:45018574 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr6:45018614 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
Chr6:45018825 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:45018869 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:45019122 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B10,B3,C72,D9 |
Chr6:45019478 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B42 |
Chr6:45019740 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr6:45021478 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:45021583 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
Chr6:45022061 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B134 |
Chr6:45022171 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C13,C30 |
Chr6:45022179 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。