当前解析结果
SmilChr06G001606| 统一新 Gene ID | SmilChr06G001606 |
|---|---|
| 名称 | SmilChr06G001606 |
| 描述 | phosphoethanolamine N-methyltransferase 1-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 17895086 - 17900705 / - |
| NCBI Gene ID | LOC130990262 |
|---|---|
| GeneID | 130990262 |
| locus_tag | - |
| NCBI Name | LOC130990262 |
| 原始查询 | LOC130990262 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | phosphoethanolamine N-methyltransferase 1-like |
| 产物 | phosphoethanolamine N-methyltransferase 1-like |
| Arabidopsis | AT3G18000 (XPL1)S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821324] identity=80.8; qcov=0.998; evalue=0; confidence=high |
| Rice | Os01g0695100 (OsPEAMT1)- identity=77.5; qcov=0.996; evalue=0; confidence=high |
| GO | GO:0000234 (phosphoethanolamine N-methyltransferase activity); GO:0006656 (phosphatidylcholine biosynthetic process) |
| KEGG | smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF01209 (Ubie_methyltran); PF02353 (CMAS); PF03848 (TehB); PF05175 (MTS); PF05891 (Methyltransf_PK); PF07021 (MetW); PF08241 (Methyltransf_11); PF08242 (Methyltransf_12); PF13489 (Methyltransf_23); PF13649 (Methyltransf_25); PF13847 (Methyltransf_31) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990262 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057770478.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057770478.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057770478.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057770478.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057770478.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:17896340 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,C46 |
Chr6:17896409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,B66 |
Chr6:17896662 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C42 |
Chr6:17896758 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:17897126 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C85 |
Chr6:17897166 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr6:17898336 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057770478.1PF01209
Ubie_methyltran 48-156 aa
PF13489
Methyltransf_23 48-161 aa
PF13847
Methyltransf_31 53-183 aa
PF03848
TehB 55-154 aa
PF05891
Methyltransf_PK 55-190 aa
PF13649
Methyltransf_25 57-152 aa
PF08242
Methyltransf_12 58-154 aa
PF08241
Methyltransf_11 58-156 aa
PF05175
MTS 263-354 aa
PF02353
CMAS 267-462 aa
PF01209
Ubie_methyltran 272-388 aa
PF13489
Methyltransf_23 275-425 aa
PF07021
MetW 280-362 aa
PF13847
Methyltransf_31 282-393 aa
PF13649
Methyltransf_25 286-379 aa
PF08242
Methyltransf_12 287-380 aa
PF08241
Methyltransf_11 287-383 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057770478.1 |
Pfam | PF01209 |
Ubie_methyltran | Family | 48 | 156 | 1.1e-19 | 71.4 | ubiE/COQ5 methyltransferase family |
XP_057770478.1 |
Pfam | PF13489 |
Methyltransf_23 | Domain | 48 | 161 | 2.1e-30 | 106.3 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF13847 |
Methyltransf_31 | Domain | 53 | 183 | 2.8e-36 | 125.3 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF03848 |
TehB | Family | 55 | 154 | 1.8e-10 | 41.3 | Tellurite resistance protein TehB |
XP_057770478.1 |
Pfam | PF05891 |
Methyltransf_PK | Family | 55 | 190 | 6.9e-13 | 49.3 | AdoMet dependent proline di-methyltransferase |
XP_057770478.1 |
Pfam | PF13649 |
Methyltransf_25 | Domain | 57 | 152 | 6e-39 | 133.4 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF08242 |
Methyltransf_12 | Domain | 58 | 154 | 9.6e-28 | 97.5 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF08241 |
Methyltransf_11 | Domain | 58 | 156 | 2.7e-38 | 131.2 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF05175 |
MTS | Domain | 263 | 354 | 9.7e-11 | 42.2 | Methyltransferase small domain |
XP_057770478.1 |
Pfam | PF02353 |
CMAS | Family | 267 | 462 | 3.6e-17 | 63.3 | Mycolic acid cyclopropane synthetase |
XP_057770478.1 |
Pfam | PF01209 |
Ubie_methyltran | Family | 272 | 388 | 1.1e-19 | 71.4 | ubiE/COQ5 methyltransferase family |
XP_057770478.1 |
Pfam | PF13489 |
Methyltransf_23 | Domain | 275 | 425 | 2.1e-30 | 106.3 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF07021 |
MetW | Family | 280 | 362 | 3e-06 | 27.7 | Methionine biosynthesis protein MetW |
XP_057770478.1 |
Pfam | PF13847 |
Methyltransf_31 | Domain | 282 | 393 | 2.8e-36 | 125.3 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF13649 |
Methyltransf_25 | Domain | 286 | 379 | 6e-39 | 133.4 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF08242 |
Methyltransf_12 | Domain | 287 | 380 | 9.6e-28 | 97.5 | Methyltransferase domain |
XP_057770478.1 |
Pfam | PF08241 |
Methyltransf_11 | Domain | 287 | 383 | 2.7e-38 | 131.2 | Methyltransferase domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。