Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001635`

染色体: Chr06 坐标: 18325306-18330759 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001635`
名称	SmilChr06G001635
描述	mitogen-activated protein kinase 9-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	18325306 - 18330759 / `+`

ID 对照

NCBI Gene ID	`LOC130990297`
GeneID	`130990297`
locus_tag	`-`
NCBI Name	`LOC130990297`
原始查询	`LOC130990297`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitogen-activated protein kinase 9-like
产物	mitogen-activated protein kinase 9-like
Arabidopsis	`AT3G18040` (MPK9) MAP kinase 9 [Source:NCBI gene (formerly Entrezgene);Acc:821329] identity=83.5; qcov=0.981; evalue=0; confidence=high
Rice	`Os06g0708000` (BWMK1) - identity=77.3; qcov=0.985; evalue=0; confidence=high
GO	GO:0004707 (MAP kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG	smil04016 (MAPK signaling pathway - plant - Salvia miltiorrhiza (redroot sage))
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130990297

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057770496.1`
2	Nucleus	细胞核	0.40000	`XP_057770497.1`
3	Chromosome	染色体	0.00000	`XP_057770496.1`
4	Centromere	着丝粒	0.00000	`XP_057770496.1`
5	Chromatin	染色质	0.00000	`XP_057770496.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:18325686`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B101
`Chr6:18325782`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B23,C64,C66
`Chr6:18327255`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:18327712`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A2,C42
`Chr6:18328103`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B24,B4,B46,C8
`Chr6:18329161`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B24,B4,B46,C8
`Chr6:18330022`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B12,B24,B39,C36,C6
`Chr6:18330401`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B23,C64,C66

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057770496.1

578 aa

289

578

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 91-382 aa PF07714 PK_Tyr_Ser-Thr 92-304 aa

XP_057770497.1

519 aa

260

519

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 32-323 aa PF07714 PK_Tyr_Ser-Thr 33-245 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057770496.1`	Pfam	`PF00069`	Pkinase	Domain	91	382	5.5e-66	223.4	Protein kinase domain
`XP_057770496.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	92	304	2.2e-30	106.5	Protein tyrosine and serine/threonine kinase
`XP_057770497.1`	Pfam	`PF00069`	Pkinase	Domain	32	323	3.9e-66	223.8	Protein kinase domain
`XP_057770497.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	33	245	1.7e-30	106.9	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057914513.1
GGCAAGCACAATAATTCAAAGTTCAAACCCCGGTTTTCCCCTCTCTCTCATAAAACACAAATAAATAGATAAAAACAGATTCATTTAATTCACATATTAGCGATGAGTGAATGAGATCATAATATCCACTTGCCAATTTATTATTAGTCGGTTATTTTCCGCATTAAACAATCCCCAAAACCATAGTTTTAATTTCCAATTTAAAGAAAAATGGTGGAATCGGAAACTGGCCTGCAGAAGTCCAAATCGGCAAATTCCCA...

XM_057914514.1
GAACGCGCCCTTTCCATTGTTGACGACTTTGATATTTCGGGCCTCAAGTTGATTAAAGTCCCCAAGCGCCTCGATTTCCCATTTTCAAACCCCGCTATGGATTCCCACAAAAAGGTATTGTTGAAGGATAAAAGTTGTTGTTCCGTTTGGCGGTTGGAGTGAATGGGGCTTTTATATTCGCTGCCTTTTGCATCTTTTGATGCTGAGAGTAATCTGGAAACCGAATTCTTCACAGAGTATGGGGAGGCAAGTAGGTATCA...

CDS

2 records

下载 CDS FASTA

LOC130990297
ATGGGGGGAGGCACATTCGTGGACGGAGTTCGTCGCTGGTTCCAACGCCGCCCAAACACCACTTCCAATATTAGTAACAATGAGCTACAGCCGCATGCAGTTTTGACGGAACGCGCCCTTTCCATTGTTGACGACTTTGATATTTCGGGCCTCAAGTTGATTAAAGTCCCCAAGCGCCTCGATTTCCCATTTTCAAACCCCGCTATGGATTCCCACAAAAAGAGTAATCTGGAAACCGAATTCTTCACAGAGTATGGGGA...

LOC130990297
ATGGGGCTTTTATATTCGCTGCCTTTTGCATCTTTTGATGCTGAGAGTAATCTGGAAACCGAATTCTTCACAGAGTATGGGGAGGCAAGTAGGTATCAGGTCCAAGAAGTTATAGGCAAAGGTAGTTATGGCGTTGTAGGTTCTGCAATTGATACTCATACTGGAGAAAGAGTTGCAATAAAAAAGATCAATGATGTCTTTGAGCATGTTTCTGATGCCACGCGAATCCTCAGAGAAATCAAGCTTCTTCGCCTGCTTCG...

Protein

2 records

下载 Protein FASTA

XP_057770496.1
MGGGTFVDGVRRWFQRRPNTTSNISNNELQPHAVLTERALSIVDDFDISGLKLIKVPKRLDFPFSNPAMDSHKKSNLETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYTHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRW...

XP_057770497.1
MGLLYSLPFASFDAESNLETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYTHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDLMTDLLGTPPPE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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