Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003186`

染色体: Chr01 坐标: 50611651-50613628 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003186`
名称	SmilChr01G003186
描述	acetylglutamate kinase, chloroplastic
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	50611651 - 50613628 / `-`

ID 对照

NCBI Gene ID	`LOC130990670`
GeneID	`130990670`
locus_tag	`-`
NCBI Name	`LOC130990670`
原始查询	`LOC130990670`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	acetylglutamate kinase, chloroplastic
产物	acetylglutamate kinase%2C chloroplastic
Arabidopsis	`AT3G57560` (NAGK) N-acetyl-l-glutamate kinase [Source:NCBI gene (formerly Entrezgene);Acc:824923] identity=65.8; qcov=1.01; evalue=3.12e-150; confidence=high
Rice	`Os04g0550500` (OsNAGK1) - identity=74.9; qcov=0.809; evalue=3.15e-153; confidence=high
GO	GO:0003991 (acetylglutamate kinase activity); GO:0004042 (L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0006526 (L-arginine biosynthetic process); GO:0009534 (chloroplast thylakoid); GO:0034618 (arginine binding)
KEGG	smil00220 (Arginine biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01210 (2-Oxocarboxylic acid metabolism - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage))
Pfam	PF00696 (AA_kinase)
InterPro	-
eggNOG	-
NR	GeneID:130990670

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057770879.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057770879.1`
3	Nucleus	细胞核	0.00000	`XP_057770879.1`
4	Chromosome	染色体	0.00000	`XP_057770879.1`
5	Centromere	着丝粒	0.00000	`XP_057770879.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:50612263`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B49
`Chr1:50612523`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A21,B93
`Chr1:50612695`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B11,C10

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057770879.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

XP_057770882.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

XP_057770886.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

XP_057770891.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

XP_057770897.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

XP_057770900.1

345 aa

172

345

AA_kinase

PF00696 AA_kinase 84-322 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057770879.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family
`XP_057770882.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family
`XP_057770886.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family
`XP_057770891.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family
`XP_057770897.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family
`XP_057770900.1`	Pfam	`PF00696`	AA_kinase	Family	84	322	8.9e-45	153.9	Amino acid kinase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057914914.1
ATTATTATTATTATTATTATTATTATTATTATTATTCAAAAATTAAAAACTGAAAAATCACACAACAAATGCCTAGAGTACGGATCGTAAACACTACACTGCAATTGAAGTTCAAAAATCAAATTACACACACAACCCTAGCCGCCGCATCACCACCTCTCCTCCGCCGGCCCGCCGTGCCAGCAGAGCCCGCAGGCTGCAGCCTCCCGCGTGCCCAGCACCGCGAATCCGCGAGCTCGCAGCCACCCACGCACCACTGG...

XM_057914896.1
ATTCAAAAATTAAAAACTGAAAAATCACACAACAAATGCCTAGAGTACGGATCGTAAACACTACACTGCAATTGAAGTTCAAAAATCAAATTACACACACAACCCTAGCCGCCGCATCACCACCTCTCCTCCGCCGGCCCGCCGTGCCAGCAGAGCCCGCAGGCTGCAGCCTCCCGCGTGCCCAGCACCGCGAATCCGCGAGCTCGCAGCCACCCACGCACCACTGGAGGTCCGCTACAGCCCGCCGCGCCGCTGCTCCG...

CDS

6 records

下载 CDS FASTA

LOC130990670
ATGTTAGCTGCCAATATCCACCCGATTAGTTCCCCTTCTCCTGCAGTTGTTGAAAAATCTAGTAGTTTCGCTCTTTCTTGGCACACCGCAGCCCCTTTGGCCAAATTCAAGCCCAACCGTATAAGCACAAGCCTCAAATCATCTCTACAGTCGATTGCAGTTCCGGAGGTTGATAAAGATGCCACCTCTGCTCAAACCCGAGTCGAGATTTTATCTGAAGCATTGCCCTTTATCCAAAAATTCCGTGGCAAAACTATTGT...

Protein

6 records

下载 Protein FASTA

XP_057770879.1
MLAANIHPISSPSPAVVEKSSSFALSWHTAAPLAKFKPNRISTSLKSSLQSIAVPEVDKDATSAQTRVEILSEALPFIQKFRGKTIVVKYGGAAMKSEALRASVIADVVLLSCVGLRIVFVHGGGPEINQWLGKLNIEPNFLNGLRVTDASTMEIVSMVLVGKVNKQLVALINKAGGTAVGLSGIDGRLLMARPSPNSSQLGFVGDIVSVDPTIIRPLIDNNHLPVIASVAADSTGQAYNINADTAAGELAAALGAEKLI...

XP_057770882.1
MLAANIHPISSPSPAVVEKSSSFALSWHTAAPLAKFKPNRISTSLKSSLQSIAVPEVDKDATSAQTRVEILSEALPFIQKFRGKTIVVKYGGAAMKSEALRASVIADVVLLSCVGLRIVFVHGGGPEINQWLGKLNIEPNFLNGLRVTDASTMEIVSMVLVGKVNKQLVALINKAGGTAVGLSGIDGRLLMARPSPNSSQLGFVGDIVSVDPTIIRPLIDNNHLPVIASVAADSTGQAYNINADTAAGELAAALGAEKLI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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