当前解析结果
SmilChr06G002226| 统一新 Gene ID | SmilChr06G002226 |
|---|---|
| 名称 | SmilChr06G002226 |
| 描述 | uncharacterized SmilChr06G002226 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 31384361 - 31386741 / + |
| NCBI Gene ID | LOC130990761 |
|---|---|
| GeneID | 130990761 |
| locus_tag | - |
| NCBI Name | LOC130990761 |
| 原始查询 | LOC130990761 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=30.8; qcov=0.485; evalue=7.3e-16; confidence=low |
| Rice | Os12g0156200- identity=26.7; qcov=0.489; evalue=5.73e-07; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990761 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057770976.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057770976.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057770976.1 |
| 4 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057770976.1 |
| 5 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057770976.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:31384365 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B39,C20,C65,C68 |
Chr6:31384367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr6:31384377 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A14 |
Chr6:31384536 |
C |
CA |
1bp_insertion | frameshift_variant | 4 | B103,B125,B29,C54 |
Chr6:31384536 |
C |
CA |
1bp_insertion | CDS_variant | 4 | B103,B125,B29,C54 |
Chr6:31384552 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr6:31384554 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B103 |
Chr6:31384583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A3,B12,B66,B98 |
Chr6:31384596 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr6:31384627 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | B103,B33,B40,B9,C63,C66 |
Chr6:31384631 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C36 |
Chr6:31384652 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C59 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。