当前解析结果
SmilChr06G002276| 统一新 Gene ID | SmilChr06G002276 |
|---|---|
| 名称 | SmilChr06G002276 |
| 描述 | uncharacterized SmilChr06G002276 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 32626451 - 32627530 / - |
| NCBI Gene ID | LOC130990774 |
|---|---|
| GeneID | 130990774 |
| locus_tag | - |
| NCBI Name | LOC130990774 |
| 原始查询 | LOC130990774 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=38.9; qcov=0.15; evalue=2.31e-06; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990774 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057770990.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057770990.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057770990.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057770990.1 |
| 5 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057770990.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:32626466 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B120 |
Chr6:32626634 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B12,B53,B94,C30,C59 |
Chr6:32626642 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr6:32626685 |
C |
CAT |
2bp_insertion | frameshift_variant | 1 | C9 |
Chr6:32626685 |
C |
CAT |
2bp_insertion | CDS_variant | 1 | C9 |
Chr6:32626689 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
Chr6:32626691 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
Chr6:32626693 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B106,B37 |
Chr6:32626727 |
C |
CTT |
2bp_insertion | frameshift_variant | 4 | B16,C30,C53,C74 |
Chr6:32626727 |
C |
CTT |
2bp_insertion | CDS_variant | 4 | B16,C30,C53,C74 |
Chr6:32626745 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C53,C74 |
Chr6:32626789 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C26 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。