当前解析结果
SmilChr06G002319| 统一新 Gene ID | SmilChr06G002319 |
|---|---|
| 名称 | SmilChr06G002319 |
| 描述 | uncharacterized SmilChr06G002319 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 33456850 - 33457977 / - |
| NCBI Gene ID | LOC130990782 |
|---|---|
| GeneID | 130990782 |
| locus_tag | - |
| NCBI Name | LOC130990782 |
| 原始查询 | LOC130990782 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G17250 (AT4G17250)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439] identity=36.4; qcov=0.821; evalue=1.65e-52; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990782 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057770998.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057770998.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057770998.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057770998.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057770998.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:33456883 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr6:33456941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr6:33456967 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
Chr6:33456996 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:33457022 |
C |
T |
EMS_canonical_SNV | stop_gained | 11 | A22,A3,B106,B130,B70,C2,C52,C60,C65,C70,C80 |
Chr6:33457024 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr6:33457050 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A10,B110 |
Chr6:33457051 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr6:33457063 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
Chr6:33457076 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
Chr6:33457080 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr6:33457083 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。