当前解析结果
SmilChr06G002582| 统一新 Gene ID | SmilChr06G002582 |
|---|---|
| 名称 | SmilChr06G002582 |
| 描述 | uncharacterized SmilChr06G002582 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 37045143 - 37046604 / - |
| NCBI Gene ID | LOC130990857 |
|---|---|
| GeneID | 130990857 |
| locus_tag | - |
| NCBI Name | LOC130990857 |
| 原始查询 | LOC130990857 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0523701; species=rice; confidence=low |
| 产物 | hit=Os06g0523701; species=rice; confidence=low |
| Arabidopsis | -- |
| Rice | Os06g0523701- identity=43.9; qcov=0.348; evalue=1.38e-32; confidence=low |
| GO | GO:0003676 (nucleic acid binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990857 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771069.1 |
| 2 | Chromosome | 染色体 | 0.20000 | XP_057771069.1 |
| 3 | Telomere | 端粒 | 0.20000 | XP_057771069.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057771069.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057771069.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:37045250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr6:37045256 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
Chr6:37045310 |
A |
ATG |
2bp_insertion | frameshift_variant | 180 | A1,A10,A11,A13,A14,A15,A18,A19,A2,A20,A21,A22,A24,A3,A4,A6,A7,A8,A9,B10,B101,B102,B103,B104,B105,B107,B108,B109,B110,B112,B113,B114,B115,B117,B12,B120,B121,B122,B123,B126,B129,B13,B130,B132,B134,B135,B136,B137,B139,B15,B18,B19,B2,B20,B21,B22,B24,B25,B26,B27,B28,B3,B31,B32,B33,B35,B36,B39,B41,B42,B43,B44,B45,B46,B47,B5,B51,B52,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B66,B67,B69,B70,B71,B72,B74,B77,B78,B79,B8,B80,B82,B84,B85,B86,B87,B88,B9,B90,B92,B93,B94,B95,B96,B97,B98,C1,C10,C14,C16,C17,C18,C19,C20,C23,C24,C27,C3,C30,C31,C33,C34,C36,C37,C39,C4,C40,C41,C42,C43,C44,C45,C47,C5,C50,C51,C52,C53,C55,C56,C57,C58,C6,C62,C63,C65,C67,C70,C72,C73,C74,C77,C78,C79,C8,C81,C84,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D7,D9 |
Chr6:37045313 |
GAA |
G |
2bp_deletion | frameshift_variant | 180 | A1,A10,A11,A13,A14,A15,A18,A19,A2,A20,A21,A22,A24,A3,A4,A6,A7,A8,A9,B10,B101,B102,B103,B104,B105,B107,B108,B109,B110,B111,B112,B113,B114,B115,B117,B12,B120,B121,B122,B123,B126,B129,B13,B130,B132,B134,B135,B136,B137,B139,B15,B18,B19,B2,B20,B21,B22,B24,B25,B26,B27,B28,B3,B31,B32,B33,B35,B36,B41,B42,B43,B44,B45,B46,B47,B5,B51,B52,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B66,B67,B69,B70,B71,B72,B74,B77,B78,B79,B8,B80,B82,B84,B85,B86,B87,B88,B9,B90,B92,B93,B94,B95,B96,B97,B98,C1,C10,C14,C16,C17,C18,C19,C20,C23,C24,C27,C3,C30,C31,C33,C34,C36,C37,C39,C4,C40,C41,C42,C43,C44,C45,C47,C5,C50,C51,C52,C53,C55,C56,C57,C58,C6,C62,C63,C65,C67,C70,C72,C73,C74,C77,C78,C79,C8,C81,C84,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D7,D9 |
Chr6:37045356 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B32,D10 |
Chr6:37045366 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B10,B65,C49 |
Chr6:37045377 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B131,B83,C59 |
Chr6:37045405 |
C |
CT |
1bp_insertion | frameshift_variant | 28 | A6,A7,B108,B120,B126,B13,B135,B22,B24,B26,B36,B42,B43,B45,B54,B56,B63,B71,B96,C19,C20,C30,C40,C41,C63,C75,C79,D6 |
Chr6:37045413 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr6:37045448 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B28,B81 |
Chr6:37045461 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr6:37045514 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | A24 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。