当前解析结果
SmilChr06G002932| 统一新 Gene ID | SmilChr06G002932 |
|---|---|
| 名称 | SmilChr06G002932 |
| 描述 | uncharacterized SmilChr06G002932 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 42168195 - 42168665 / + |
| NCBI Gene ID | LOC130990975 |
|---|---|
| GeneID | 130990975 |
| locus_tag | - |
| NCBI Name | LOC130990975 |
| 原始查询 | LOC130990975 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0521000; species=rice; confidence=low |
| 产物 | hit=Os06g0521000; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=25.6; qcov=0.801; evalue=2.12e-10; confidence=low |
| Rice | Os06g0521000- identity=30.6; qcov=0.776; evalue=1.01e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990975 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771167.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057771167.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057771167.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057771167.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057771167.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:42168198 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B48,C30 |
Chr6:42168201 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C80,D11 |
Chr6:42168202 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B2,B48 |
Chr6:42168204 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B33,D10 |
Chr6:42168210 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C5,C86,D9 |
Chr6:42168231 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C79 |
Chr6:42168264 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr6:42168273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B17,C50 |
Chr6:42168275 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr6:42168277 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B35,C26 |
Chr6:42168293 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr6:42168313 |
G |
A |
EMS_canonical_SNV | stop_gained | 11 | A3,A8,B137,B18,B40,B43,B74,C19,C29,C4,C76 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。