Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000051`

染色体: Chr07 坐标: 215296-218185 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000051`
名称	SmilChr07G000051
描述	low affinity inorganic phosphate transporter 1-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	215296 - 218185 / `+`

ID 对照

NCBI Gene ID	`LOC130991237`
GeneID	`130991237`
locus_tag	`-`
NCBI Name	`LOC130991237`
原始查询	`LOC130991237`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	low affinity inorganic phosphate transporter 1-like
产物	low affinity inorganic phosphate transporter 1-like
Arabidopsis	`AT2G32830` (PHT1;5) phosphate transporter 1;5 [Source:NCBI gene (formerly Entrezgene);Acc:817844] identity=76; qcov=0.959; evalue=0; confidence=high
Rice	`Os04g0186400` (PT4) - identity=73.4; qcov=0.993; evalue=0; confidence=high
GO	GO:0005315 (phosphate transmembrane transporter activity); GO:0006817 (phosphate ion transport); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:130991237

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057771328.1`
2	Vacuole membrane	液泡膜	0.20000	`XP_057771328.1`
3	Nucleus	细胞核	0.00000	`XP_057771329.1`
4	Chromosome	染色体	0.00000	`XP_057771329.1`
5	Centromere	着丝粒	0.00000	`XP_057771329.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:217058`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C48
`Chr7:217216`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B12,B13,C46,D4,D7
`Chr7:217237`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B2,B82,C18,D6
`Chr7:217244`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B24
`Chr7:217370`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C11,C69
`Chr7:217525`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	D4,D6
`Chr7:217759`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C85
`Chr7:217798`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B131,B35
`Chr7:217870`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C62
`Chr7:217896`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B120,B6,C54,C67
`Chr7:217961`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C85
`Chr7:218017`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771328.1

564 aa

282

564

Sugar_tr

MFS_1

PF00083 Sugar_tr 49-539 aa PF07690 MFS_1 90-481 aa

XP_057771329.1

542 aa

271

542

Sugar_tr

MFS_1

PF00083 Sugar_tr 27-517 aa PF07690 MFS_1 68-459 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771328.1`	Pfam	`PF00083`	Sugar_tr	Family	49	539	2.5e-51	175.7	Sugar (and other) transporter
`XP_057771328.1`	Pfam	`PF07690`	MFS_1	Family	90	481	4.8e-22	79.1	Major Facilitator Superfamily
`XP_057771329.1`	Pfam	`PF00083`	Sugar_tr	Family	27	517	2.1e-51	175.9	Sugar (and other) transporter
`XP_057771329.1`	Pfam	`PF07690`	MFS_1	Family	68	459	4.1e-22	79.3	Major Facilitator Superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915346.1
AGCGACAAATATCGATGAGTCCGGCACACAGCTGCATCCTTAAATTTCAAGACAAAATCAATTTTGAAGCTCGTCTACTATTTAATAATCTCTCTCTTCACTCTCACTTGTCTAGTGAGCAGGTTTTTTGCTTCATGTCGCCTTCTTCATAAATAGATCAAGAAGTGATATTAATCAGCATGGGTAGTAGAGAGAATCTCCAAGTGCTCGACGCACTTGATACCGCCAAGACACAGCTTTACCATTTCACGACCATAGTG...

XM_057915345.1
CTCTCGGCTTAATTTCAAAGTCCTCATTTAATTTGACAATAAATATACTAGTGTGTGTCAACGTCAATCTCTCGAACATAAACATTAATTCGCCACCAACTATAATTATGTGTCGAATTATATTCCCTAATGAATCACATAATCGAAGAGATCAAGAAGTGATATTAATCAGCATGGGTAGTAGAGAGAATCTCCAAGTGCTCGACGCACTTGATACCGCCAAGACACAGCTTTACCATTTCACGACCATAGTGATCGCC...

CDS

2 records

下载 CDS FASTA

LOC130991237
ATGTGTCGAATTATATTCCCTAATGAATCACATAATCGAAGAGATCAAGAAGTGATATTAATCAGCATGGGTAGTAGAGAGAATCTCCAAGTGCTCGACGCACTTGATACCGCCAAGACACAGCTTTACCATTTCACGACCATAGTGATCGCCGGAATGGGATTCTTCACCGACGCTTACGATCTCTTCAGCATCTCCCTCATCACCAAGCTACTCGGCCGCATTTACTACACCACCAATCTCAACGCCCCAAAGCCCGG...

LOC130991237
ATGGGTAGTAGAGAGAATCTCCAAGTGCTCGACGCACTTGATACCGCCAAGACACAGCTTTACCATTTCACGACCATAGTGATCGCCGGAATGGGATTCTTCACCGACGCTTACGATCTCTTCAGCATCTCCCTCATCACCAAGCTACTCGGCCGCATTTACTACACCACCAATCTCAACGCCCCAAAGCCCGGCACCTTGCCGCCCAAGATCTCCTCCGCCGTCACCGGCGTCGCCCTCGTCGGCACCCTCGCCGGCCA...

Protein

2 records

下载 Protein FASTA

XP_057771328.1
MCRIIFPNESHNRRDQEVILISMGSRENLQVLDALDTAKTQLYHFTTIVIAGMGFFTDAYDLFSISLITKLLGRIYYTTNLNAPKPGTLPPKISSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMIVCSLASGLSFGKSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTSGIVALAVSAAFDHAYSAPSYAADPARSTVDQADYIWRIIVMFGALPAALTFYWRMKM...

XP_057771329.1
MGSRENLQVLDALDTAKTQLYHFTTIVIAGMGFFTDAYDLFSISLITKLLGRIYYTTNLNAPKPGTLPPKISSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMIVCSLASGLSFGKSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTSGIVALAVSAAFDHAYSAPSYAADPARSTVDQADYIWRIIVMFGALPAALTFYWRMKMPETARYTALVARNAKQAARDMA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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