当前解析结果
SmilChr07G000102| 统一新 Gene ID | SmilChr07G000102 |
|---|---|
| 名称 | SmilChr07G000102 |
| 描述 | DNA-directed RNA polymerase V subunit 7-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 548125 - 549914 / + |
| NCBI Gene ID | LOC130991297 |
|---|---|
| GeneID | 130991297 |
| locus_tag | - |
| NCBI Name | LOC130991297 |
| 原始查询 | LOC130991297 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNA-directed RNA polymerase V subunit 7-like |
| 产物 | DNA-directed RNA polymerase V subunit 7-like |
| Arabidopsis | AT4G14660 (NRPE7)RNA polymerase Rpb7-like, N-terminal domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:827116] identity=61.9; qcov=0.978; evalue=1.33e-83; confidence=high |
| Rice | Os05g0157100- identity=50.3; qcov=0.972; evalue=1.83e-59; confidence=high |
| GO | GO:0003697 (single-stranded DNA binding); GO:0003727 (single-stranded RNA binding); GO:0006352 (DNA-templated transcription initiation) |
| KEGG | smil03020 (RNA polymerase - Salvia miltiorrhiza (redroot sage)) |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991297 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057771409.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057771409.1 |
| 3 | Nucleus | 细胞核 | 0.80000 | XP_057771409.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057771409.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057771409.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:549496 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr7:549517 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr7:549553 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B130,B135 |
Chr7:549619 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,B26,C12 |
Chr7:549640 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:549643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B26 |
Chr7:549667 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B93,D7 |
Chr7:549694 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B26 |
Chr7:549700 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B58,B62,B74,B88,C61 |
Chr7:549718 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr7:549773 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B110,B121,B98,C74,D7 |
Chr7:549798 |
AG |
A |
1bp_deletion | CDS_variant | 2 | C43,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。