当前解析结果
SmilChr07G000125| 统一新 Gene ID | SmilChr07G000125 |
|---|---|
| 名称 | SmilChr07G000125 |
| 描述 | uncharacterized protein At5g64816-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 731645 - 732204 / + |
| NCBI Gene ID | LOC130991318 |
|---|---|
| GeneID | 130991318 |
| locus_tag | - |
| NCBI Name | LOC130991318 |
| 原始查询 | LOC130991318 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | thionin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836604]; symbol=AT5G64816; hit=AT5G64816; species=arabidopsis; confidence=high |
| 产物 | thionin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836604]; symbol=AT5G64816; hit=AT5G64816; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G64816 (AT5G64816)thionin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:836604] identity=81; qcov=0.945; evalue=6.83e-69; confidence=high |
| Rice | Os03g0185600 (OsTHI26)- identity=75.8; qcov=0.969; evalue=4.14e-68; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991318 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 0.80000 | XP_057771436.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057771436.1 |
| 3 | Chloroplast membrane | 叶绿体膜 | 0.20000 | XP_057771436.1 |
| 4 | Chloroplast thylakoid | 类囊体 | 0.20000 | XP_057771436.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057771436.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:731696 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | D11 |
Chr7:731696 |
A |
AT |
1bp_insertion | CDS_variant | 1 | D11 |
Chr7:731872 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A19,A3,A7,B30 |
Chr7:731899 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B70 |
Chr7:731959 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B90,B92,D8 |
Chr7:731989 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B23,B99 |
Chr7:731995 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B19,B86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。