当前解析结果
SmilChr07G000250| 统一新 Gene ID | SmilChr07G000250 |
|---|---|
| 名称 | SmilChr07G000250 |
| 描述 | uncharacterized SmilChr07G000250 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 1595743 - 1596702 / - |
| NCBI Gene ID | LOC130991447 |
|---|---|
| GeneID | 130991447 |
| locus_tag | - |
| NCBI Name | LOC130991447 |
| 原始查询 | LOC130991447 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763]; symbol=AT2G32030; hit=AT2G32030; species=arabidopsis; confidence=high |
| 产物 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763]; symbol=AT2G32030; hit=AT2G32030; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G32030 (AT2G32030)Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763] identity=50.3; qcov=0.917; evalue=3.5e-53; confidence=high |
| Rice | Os03g0664800 (OSJNBb0031A14.3)- identity=50.8; qcov=0.994; evalue=6.17e-50; confidence=medium |
| GO | GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups) |
| KEGG | - |
| Pfam | PF00583 (Acetyltransf_1); PF13302 (Acetyltransf_3) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991447 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057771665.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057771665.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057771665.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057771665.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057771665.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:1596131 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr7:1596210 |
TCA |
T |
2bp_deletion | frameshift_variant | 1 | B69 |
Chr7:1596210 |
TCA |
T |
2bp_deletion | CDS_variant | 1 | B69 |
Chr7:1596316 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
Chr7:1596467 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B54,C42 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057771665.1PF13302
Acetyltransf_3 9-144 aa
PF00583
Acetyltransf_1 37-143 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057771665.1 |
Pfam | PF13302 |
Acetyltransf_3 | Domain | 9 | 144 | 5.1e-27 | 96.0 | Acetyltransferase (GNAT) domain |
XP_057771665.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 37 | 143 | 8.7e-15 | 55.7 | Acetyltransferase (GNAT) family |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。