当前解析结果
SmilChr07G000283| 统一新 Gene ID | SmilChr07G000283 |
|---|---|
| 名称 | SmilChr07G000283 |
| 描述 | probable serine/threonine-protein kinase WNK9 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 1831818 - 1835370 / - |
| NCBI Gene ID | LOC130991474 |
|---|---|
| GeneID | 130991474 |
| locus_tag | - |
| NCBI Name | LOC130991474 |
| 原始查询 | LOC130991474 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable serine/threonine-protein kinase WNK9 |
| 产物 | probable serine/threonine-protein kinase WNK9 |
| Arabidopsis | AT3G04910 (WNK1)with no lysine (K) kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:819651] identity=55.2; qcov=1.09; evalue=0; confidence=high |
| Rice | Os07g0572800 (OsWNK1)- identity=55.7; qcov=1.03; evalue=0; confidence=high |
| GO | GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0035556 (intracellular signal transduction) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr); PF12202 (OSR1_C) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991474 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057771707.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057771710.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057771707.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057771707.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057771707.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:1832042 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:1832066 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A11,B24,B60 |
Chr7:1832075 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:1832221 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B114,B125,B95,C13,D8 |
Chr7:1832284 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B89 |
Chr7:1832345 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A11,B24,B60 |
Chr7:1832421 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B37,C24,C73 |
Chr7:1832537 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B114,B125,B95,C13,D8 |
Chr7:1832624 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr7:1832681 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C41 |
Chr7:1832762 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B134 |
Chr7:1832909 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B113,B54,C21,C35 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057771707.1PF07714
PK_Tyr_Ser-Thr 27-181 aa
PF00069
Pkinase 27-305 aa
PF07714
PK_Tyr_Ser-Thr 215-289 aa
XP_057771708.1PF07714
PK_Tyr_Ser-Thr 27-265 aa
PF00069
Pkinase 27-281 aa
XP_057771709.1PF07714
PK_Tyr_Ser-Thr 27-181 aa
PF00069
Pkinase 27-305 aa
PF07714
PK_Tyr_Ser-Thr 215-289 aa
PF12202
OSR1_C 402-457 aa
XP_057771710.1PF07714
PK_Tyr_Ser-Thr 27-265 aa
PF00069
Pkinase 27-281 aa
PF12202
OSR1_C 378-433 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057771707.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 27 | 181 | 8.4e-28 | 98.1 | Protein tyrosine and serine/threonine kinase |
XP_057771707.1 |
Pfam | PF00069 |
Pkinase | Domain | 27 | 305 | 3.1e-45 | 155.4 | Protein kinase domain |
XP_057771707.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 215 | 289 | 8.4e-28 | 98.1 | Protein tyrosine and serine/threonine kinase |
XP_057771708.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 27 | 265 | 6.5e-31 | 108.3 | Protein tyrosine and serine/threonine kinase |
XP_057771708.1 |
Pfam | PF00069 |
Pkinase | Domain | 27 | 281 | 2e-49 | 169.1 | Protein kinase domain |
XP_057771709.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 27 | 181 | 7.5e-28 | 98.3 | Protein tyrosine and serine/threonine kinase |
XP_057771709.1 |
Pfam | PF00069 |
Pkinase | Domain | 27 | 305 | 2.8e-45 | 155.5 | Protein kinase domain |
XP_057771709.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 215 | 289 | 7.5e-28 | 98.3 | Protein tyrosine and serine/threonine kinase |
XP_057771709.1 |
Pfam | PF12202 |
OSR1_C | Domain | 402 | 457 | 1.5e-06 | 28.9 | Oxidative-stress-responsive kinase 1 C-terminal domain |
XP_057771710.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 27 | 265 | 6e-31 | 108.4 | Protein tyrosine and serine/threonine kinase |
XP_057771710.1 |
Pfam | PF00069 |
Pkinase | Domain | 27 | 281 | 1.9e-49 | 169.2 | Protein kinase domain |
XP_057771710.1 |
Pfam | PF12202 |
OSR1_C | Domain | 378 | 433 | 1.4e-06 | 29.0 | Oxidative-stress-responsive kinase 1 C-terminal domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。