Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003272`

染色体: Chr01 坐标: 51428178-51432176 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003272`
名称	SmilChr01G003272
描述	uncharacterized SmilChr01G003272
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	51428178 - 51432176 / `-`

ID 对照

NCBI Gene ID	`LOC130991502`
GeneID	`130991502`
locus_tag	`-`
NCBI Name	`LOC130991502`
原始查询	`LOC130991502`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	CA-responsive protein [Source:NCBI gene (formerly Entrezgene);Acc:838343]; symbol=AT1G17665; hit=AT1G17665; species=arabidopsis; confidence=medium
产物	CA-responsive protein [Source:NCBI gene (formerly Entrezgene);Acc:838343]; symbol=AT1G17665; hit=AT1G17665; species=arabidopsis; confidence=medium
Arabidopsis	`AT1G17665` (AT1G17665) CA-responsive protein [Source:NCBI gene (formerly Entrezgene);Acc:838343] identity=75; qcov=0.53; evalue=9.3e-92; confidence=medium
Rice	`Os01g0197400` (B1046G12.3) - identity=44.2; qcov=0.518; evalue=9.16e-38; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130991502

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	0.80000	`XP_057771743.1`
2	Nucleus membrane	核膜	0.40000	`XP_057771751.1`
3	Nucleus	细胞核	0.00000	`XP_057771743.1`
4	Chromosome	染色体	0.00000	`XP_057771743.1`
5	Centromere	着丝粒	0.00000	`XP_057771743.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:51428490`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A13
`Chr1:51428523`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B12,C55
`Chr1:51428627`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:51429101`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B124,C40,C65
`Chr1:51431317`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B13,B68,C42
`Chr1:51431400`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B12,C55
`Chr1:51431427`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B12,B28,C55
`Chr1:51431506`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B108,B139,B93,C16,C23
`Chr1:51431532`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A6
`Chr1:51431587`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B25,B84
`Chr1:51431655`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A21,B3,C77
`Chr1:51431667`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A18

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915768.1
AAAAGGAAAAAAAATAAAATCCCATTTCTAAACCTAGTACAACACAAAAAATAGGTAGAAAAAAGGCATTAGCTTCCAAGACTTCAAAAGATGACATTACAAAAACTTGGTAAACACAAACAAACAAACAACAAATGAAAAAGAAAACTCATCTTATAAGCAGCAGTTTCAGTCCACCTGCTGCAAAAATGCAAAAAAAAACCAAATCCACTTTTTATATATAAATAATATCCTGCAAAACACACAGTGAGAAACCGCAC...

XM_057915760.1
AAAAGGAAAAAAAATAAAATCCCATTTCTAAACCTAGTACAACACAAAAAATAGGTAGAAAAAAGGCATTAGCTTCCAAGACTTCAAAAGATGACATTACAAAAACTTGGTAAACACAAACAAACAAACAACAAATGAAAAAGAAAACTCATCTTATAAGCAGCAGTTTCAGTCCACCTGCTGCAAAAATGCAAAAAAAAACCAAATCCACTTTTTATATATAAATAATATCCTGCAAAACACACAGTGAGAAACCGCAC...

CDS

2 records

下载 CDS FASTA

LOC130991502
ATGGCGGCCACCCCAGTTGTTCTTCTAATCACTCTCCCCACTCAGAATTCGGCGCATCAAGCTCCCCTCTCCCACATTACAATGGGCTCGTCTCTCTCATTCTTCCTCCTCCTCACTTTCTCCATACTCATTTTCACCCTCTACACAATCTTGAAGAATCACAGCAGCAGCAATGGCGGAAAGGGGGAAGAGGGCTCAGAAAAAATCCAATCTTTATCTGCGAACCACCAGCAGAAGCAAGAAACGGGCCGCGAGCCCGA...

Protein

2 records

下载 Protein FASTA

XP_057771743.1
MAATPVVLLITLPTQNSAHQAPLSHITMGSSLSFFLLLTFSILIFTLYTILKNHSSSNGGKGEEGSEKIQSLSANHQQKQETGREPDPDPGNLARSLLLEILPPSSPKWDYSLYSKGEDVDDDDPGEKSGSGREDKKRRKKRARKKKPGPNEGEGKDKEELVCLYPFTKSCSATQRKIKQQYDQLVKSHGSNGLTLDQVGQFVNCLVEARNELQNKSEVIKRRFTITKALLFKADRSSFDRLRQQIYKLELEQKRLEEDA...

XP_057771751.1
MAATPVVLLITLPTQNSAHQAPLSHITMGSSLSFFLLLTFSILIFTLYTILKNHSSSNGGKGEEGSEKIQSLSANHQQKQETGREPDPDPGNLARSLLLEILPPSSPKWDYSLYSKGEDVDDDDPGEKSGSGREDKKRRKKRARKKKPGPNEGEGKDKEELVCLYPFTKSCSATQRKIKQQYDQLVKSHGSNGLTLDQVGQFVNCLVEARNELQNKSEVIKRRFTITKALLFKADRSSFDRLRQQIYKLELEQKRLEEDA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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