Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000373`

染色体: Chr07 坐标: 2535674-2542511 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000373`
名称	SmilChr07G000373
描述	uncharacterized SmilChr07G000373
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	2535674 - 2542511 / `-`

ID 对照

NCBI Gene ID	`LOC130991575`
GeneID	`130991575`
locus_tag	`-`
NCBI Name	`LOC130991575`
原始查询	`LOC130991575`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827070]; symbol=AT4G14290; hit=AT4G14290; species=arabidopsis; confidence=high
产物	alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827070]; symbol=AT4G14290; hit=AT4G14290; species=arabidopsis; confidence=high
Arabidopsis	`AT4G14290` (AT4G14290) alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827070] identity=58.8; qcov=1.03; evalue=0; confidence=high
Rice	`Os06g0609700` - identity=71.1; qcov=0.479; evalue=2.02e-133; confidence=medium
GO	-
KEGG	-
Pfam	PF00561 (Abhydrolase_1); PF02129 (Peptidase_S15); PF12146 (Hydrolase_4)
InterPro	-
eggNOG	-
NR	GeneID:130991575

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	0.60000	`XP_057771846.1`
2	Endosome	内体	0.60000	`XP_057771846.1`
3	Golgi apparatus	高尔基体	0.40000	`XP_057771847.1`
4	Vesicle	囊泡	0.40000	`XP_057771847.1`
5	Cytoplasm	细胞质	0.20000	`XP_057771846.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:2535957`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B31,B44,C48
`Chr7:2535990`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B112,B24
`Chr7:2536036`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr7:2536050`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C48
`Chr7:2536055`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B32,B40,B6,C67,D3
`Chr7:2536100`	`C`	`CT`	1bp_insertion	frameshift_variant	14	A14,A9,B103,B26,B3,B81,B85,C13,C23,C35,C51,C63,C78,C85
`Chr7:2536177`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr7:2536206`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B124,B76,B8,C25
`Chr7:2536221`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B124,B76,B8,C25
`Chr7:2536507`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C18
`Chr7:2538231`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:2538281`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C47

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771846.1

547 aa

274

547

Peptidase_S15

Hydrolase_4

Abhydrolase_1

PF02129 Peptidase_S15 46-174 aa PF12146 Hydrolase_4 67-175 aa PF00561 Abhydrolase_1 67-184 aa

XP_057771847.1

514 aa

257

514

Peptidase_S15

Hydrolase_4

Abhydrolase_1

PF02129 Peptidase_S15 13-141 aa PF12146 Hydrolase_4 34-142 aa PF00561 Abhydrolase_1 34-151 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771846.1`	Pfam	`PF02129`	Peptidase_S15	Domain	46	174	1.8e-05	25.3	X-Pro dipeptidyl-peptidase (S15 family)
`XP_057771846.1`	Pfam	`PF12146`	Hydrolase_4	Domain	67	175	2.7e-12	47.2	Serine aminopeptidase, S33
`XP_057771846.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	67	184	2.3e-09	38.0	alpha/beta hydrolase fold
`XP_057771847.1`	Pfam	`PF02129`	Peptidase_S15	Domain	13	141	1.6e-05	25.5	X-Pro dipeptidyl-peptidase (S15 family)
`XP_057771847.1`	Pfam	`PF12146`	Hydrolase_4	Domain	34	142	2.3e-12	47.5	Serine aminopeptidase, S33
`XP_057771847.1`	Pfam	`PF00561`	Abhydrolase_1	Domain	34	151	2.1e-09	38.1	alpha/beta hydrolase fold

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915863.1
CAGAAGAGCCGGATTCCAGTTCGAGTCTCTCTCTTTCTCTCTCTTCTGAGAAGAAATAGAAACGTCATAAACCGTGCTGCTTTTTGAGCCCTTTTTTAATACTATGTGACGATACACATACACACACAGATACTTGTATATCAAAATTTCTGTTTTAATTGCATGATTTATTTGGTATATTTTTTTCTATAATTCGAGAAGAAGTAAGGGGTGGTCAGGAAAGATCTTGATTGCTTGAATCTCTAATGGAACAGCTCATC...

XM_057915864.1
GATCTGTTAGATCAAGAATTTTTGCTAAAAGGCAAGTGGTACCAGAGGAAAGATTTGGAGAGCCATAAATAAAGGAAGCATGGAGGGCTGTAGGATCTTCTGCAATCAAATCGGAGAATAATATCATTGATACTTCATGTACCAGATTGGTCTTCTCTCGTTATTTGACTCCCTTCAGCATGGCTATTAGCTGTTCTTATGTTAAAAACAGCCGAGGAGATGTTCTGCAATGTAGCCATTACATGCCCGTTGTCCCTCCT...

CDS

2 records

下载 CDS FASTA

LOC130991575
ATGGAACAGCTCATCAACTTCATTATAAGACCGCCCAGAGCTGAATACAATCCAAAAAATGATCTGTTAGATCAAGAATTTTTGCTAAAAGGCAAGTGGTACCAGAGGAAAGATTTGGAGGTTAAAAACAGCCGAGGAGATGTTCTGCAATGTAGCCATTACATGCCCGTTGTCCCTCCTGAAGGAAAGACACTGCCCTGTGTAATCTACTGTCATGGAAATAGTGGTTGCCGTACAGATGCCAGTGAAGCTGCTGTTAT...

LOC130991575
ATGGCTATTAGCTGTTCTTATGTTAAAAACAGCCGAGGAGATGTTCTGCAATGTAGCCATTACATGCCCGTTGTCCCTCCTGAAGGAAAGACACTGCCCTGTGTAATCTACTGTCATGGAAATAGTGGTTGCCGTACAGATGCCAGTGAAGCTGCTGTTATATTATTGCCATCAAACATCACAGTTTTTACTCTCGACTTTTCTGGTTCTGGACTCTCTGGTGGAGAGCATGTTACTTTGGGTTGGAATGAAAAAGACGA...

Protein

2 records

下载 Protein FASTA

XP_057771846.1
MEQLINFIIRPPRAEYNPKNDLLDQEFLLKGKWYQRKDLEVKNSRGDVLQCSHYMPVVPPEGKTLPCVIYCHGNSGCRTDASEAAVILLPSNITVFTLDFSGSGLSGGEHVTLGWNEKDDLRAVVDYLRADGNVSLIGLWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKVRLPKFTVKFAIQYMRKAIQRKAKFDIMELNTIKVAKSCFVPVLFGHAIEDDFIQPHHSDRVFDAYVGDKNIIKFEG...

XP_057771847.1
MAISCSYVKNSRGDVLQCSHYMPVVPPEGKTLPCVIYCHGNSGCRTDASEAAVILLPSNITVFTLDFSGSGLSGGEHVTLGWNEKDDLRAVVDYLRADGNVSLIGLWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKVRLPKFTVKFAIQYMRKAIQRKAKFDIMELNTIKVAKSCFVPVLFGHAIEDDFIQPHHSDRVFDAYVGDKNIIKFEGDHNSPRPQFYFDSISIFFNNVLQPPEDEGGSRY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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